Vitis riparia (riverbank grape): 117922731
Help
Entry
117922731 CDS
T07274
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117922731
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117922731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
117922731
NCBI-ProteinID:
XP_034696830
LinkDB
All DBs
Position
9:7197055..7201835
Genome browser
AA seq
399 aa
AA seq
DB search
MTTVSQMDLLPFFLMLCMATSGMSIMTNSLLSPSFNVVSYGAVGNGKTDDSKAFMKAWSA
VCHGQSHDAHLIIPPKTFLLKPVKFSGPCKASRITVQVLGKLVASTNKRAFNGNYWLLFH
KVKGLTLWGKGSIDGKGSAWWQQHDSDFRPAALKFYECPGMVLKGLTHLNSQKQHIVITK
CHGALISKIKVIAPEDSPNTDGINIASSKNVRVQRSHISTGDDCIAISAGSSNIKIKGMT
CAPSHGISIGALGDPGKPDESVEKVDVSDCTFKGPGIGVRIKTWQGGRGRVRNISYKNIE
VQEVGTPIVIDQFYCPRGGCKNNSDAVRVSDVSYSGIRGTYTRDDAMSLLCSQNAACTNI
VLDNINLRTMDPKKAAKVKCFNVKGRSQDVKPVVDCLSH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtatcacagatggaccttctccccttcttcttgatgttgtgcatggcaaca
tctggaatgagcattatgacaaattctctactcagtccttctttcaatgtggtgagctat
ggagctgttggcaatggaaaaacagatgattccaaagcatttatgaaggcatggtctgca
gtctgccatggtcaatcacatgatgctcaccttatcataccaccgaagacattcttactg
aagcctgtgaaatttagcggcccatgcaaagcctctcgtatcactgttcaggtattagga
aaactcgtagcatctaccaacaaaagggcattcaacggtaactattggcttctcttccat
aaggtgaaagggcttactctgtggggaaagggatccatcgacggcaaagggtctgcttgg
tggcaacagcatgacagtgactttagaccagccgcactgaaattttatgagtgtccaggc
atggtgcttaaaggattgacccatctcaacagccaaaaacaacacattgttatcaccaaa
tgccatggtgcattgatctctaagatcaaagtaatcgcccctgaagatagccctaataca
gacggtatcaatattgctagctcaaagaatgtacgagtacagcgctctcacatttcaact
ggtgatgactgtattgctattagtgcgggttcttctaatatcaaaataaagggcatgaca
tgtgcacctagtcatgggattagtattggagcgcttggagatcctggaaaacctgatgaa
tcagtggaaaaagtagatgttagtgattgtacatttaaaggacctgggattggagttagg
atcaaaacatggcagggaggacggggccgtgtcaggaacatttcatacaagaacattgaa
gtccaagaagttggcactcccattgtcatcgaccaattttactgtccccgcggaggttgc
aagaacaatagcgacgcagttcgggtgagcgacgtatcgtacagtgggatccgggggact
tatactagggatgatgccatgtctttgctttgtagtcagaatgctgcctgcaccaacatt
gtgcttgataatatcaatttgagaaccatggatccaaagaaggcggctaaggttaagtgc
ttcaatgtcaaggggagatcacaggatgtgaaacctgttgtcgattgcctatcacactag
DBGET
integrated database retrieval system
