Vitis riparia (riverbank grape): 117922737
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Entry
117922737 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11-like
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117922737
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117922737
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117922737
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
AAA_11
DEAD
HEXIM
Motif
Other DBs
NCBI-GeneID:
117922737
NCBI-ProteinID:
XP_034696837
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All DBs
Position
9:4377198..4382287
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AA seq
915 aa
AA seq
DB search
MEESEPPKFPAFPYEPYSIQIDFMKALYRSLNTGGVSMLESPTGTGKTLSIICSALQWLV
DRKQQLKSEANQTQTPGGGTGSDDEPDWMKNFVANKDPAVEDKMKKKLRFGKEKPDKGRN
QGSCRNLLSPNLIEEGIHEKKDSENLGEINGVKLNDEEFLVEDYESEEEEGVGVGKSKRK
AGGVSINSSSDEEEEDDNEEDGEGLKIYFCSRTHSQLSQFVKELRKTIFGNEMKVVCLGS
RKISCINEEVLKLGNSTRINERCLELQQNKKKEVSKLKNLGSEGRIRRTKASSGCPMLRN
HKLQKQFRSEISQQGALDIEDLVHLGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSR
ESLGLNLKNNIVIIDEAHNLADSLISMYDAKITSLQLEHVHSHIKQYLQRFRNFLGPGNR
RYIQTLLVVARLFFKXLLNGKDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNI
NLVKLLHYVKESNIIHKVSGYGDKVANLQKGSALNDGGESNEEGSTLSGFRAFVDMLQSL
TNNDGDGKIIISRAKQACSGQQGGYLKYVMLTGEKIFSEIVDQAHAVILAGGTXQPIEET
RERLXPRLTSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLL
LCNLVTVVPEGIVVFFSSFDYEGQVYDAWKASGILERIKKKKCVFREPRKNTDVEFVLKE
YKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDI
ELLERVKYIEGLGVSISSRSTKFSVGNEYYSGDVQVGFDILRSCKHRGKEYYENLCMKAV
NQSIGRAIRHINDYAAILLVDARYASDPLKRSFSHPINKLPQWIKDRIVPVTGKYGEAQR
LLHQFFKFNKKRGCR
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtgaaccccccaaatttccggcgtttccatatgagccctattcgattcag
attgatttcatgaaagccctttatcgctctctcaatacgggtggtgtttctatgctcgaa
agccccactgggactggcaaaactctgagtataatttgcagtgctctgcaatggcttgtt
gacaggaagcaacaactcaaatctgaagccaatcagactcaaacacctggaggtggaact
ggttcagatgatgaacccgactggatgaaaaattttgtcgcaaacaaagatcctgcagtg
gaggacaagatgaagaagaagctaaggtttggaaaggagaaaccagataagggaagaaat
caaggaagttgcagaaacctgttatcacctaatcttatagaggaaggtattcatgagaag
aaagatagtgagaatctgggggaaattaatggggtgaaattgaatgatgaagagttcttg
gtggaagactatgaaagcgaagaggaagagggtgttggtgtagggaaatcaaagaggaag
gctggtggggtttctataaattcatcaagtgatgaggaagaggaagatgacaacgaggag
gatggagagggattgaagatttatttctgtagtcggacccactcacaactgtcgcagttt
gtgaaggagttaagaaagactatttttggtaatgagatgaaggttgtatgtttgggctct
aggaaaatttcctgcatcaatgaagaggttttgaagctgggaaactctactcgtatcaac
gaacggtgtttggagcttcaacagaacaagaaaaaagaagtttccaaacttaagaacttg
ggttcagaaggaagaatacgtaggaccaaggcttcttctggatgcccaatgcttagaaat
cacaaattacaaaagcaatttaggagtgagatttcacaacaaggagctttggatattgaa
gaccttgtgcaccttggaagaaggatgggaacttgtccatattatggctcccgaagcatc
atcccagcagctgatcttgtggttcttccatatcagtctcttctatcaaaatcatcccgc
gaatcacttggtctgaatttgaagaataacattgttataatagacgaagctcacaatcta
gccgattctctcattagcatgtatgatgcaaaaatcacttcgttacagttggagcatgtg
cattctcatataaagcagtatctgcaaagatttcgcaattttttaggacctggcaatcga
agatatatccaaacattattagtcgttgccaggcttttcttcaaanttcttcttaatggt
aaggatacaagtttggttgaccctggccatgatgctgaaaaagcttttggagcgaaaagt
gcctctgattcttctatggccattaatgattttttgttctctctcaatattgataacatc
aacttggtcaaattgctacattatgtaaaggaaagcaatatcatccacaaggtaagtggt
tatggagataaagtggctaacttgcaaaaaggttcagcccttaatgatggtggagaaagt
aatgaggagggaagtactttgtctggatttcgggcatttgttgatatgttgcagtcacta
acaaataatgatggtgatggaaagataataatctcaagggcaaaacaagcatgttctgga
caacaaggaggatatctaaaatatgttatgctcacaggggagaagattttttctgagatt
gtggatcaagcacatgctgtcatactggcaggaggaaccntgcaaccaattgaggagaca
agggagcgactanttccacggttaacatctgatcagttccatttcttttcgtgcagtcac
attatccctcctgagagtattttgcctgttgctctttctcatggcccctctggccagtca
tttgattttagttacagctccagaagctcatcaatcatgatagaggagctaggactcttg
ctttgcaatttggtgacagtggttcctgaaggaattgttgtgttcttctcttcatttgat
tatgaaggacaggtctatgatgcatggaaggcttcaggcatccttgagaggattaagaag
aagaagtgtgtatttagagagcctagaaaaaacacagatgtggaatttgttcttaaggaa
tacaaggaagcaattgataaatcatctgacaggaatcagaaagaagatccagtgcctcag
aatggtgctatactcctagctgtagtcggtgggaagatatcagaaggtatcaacttcagc
gatggaatgggtcgatgcattgtcatggttggactgccctaccctagtccatctgacatt
gagttgttggagagggtgaagtatattgaaggcctgggagtctcaatctccagccgatca
acaaagttttcagttggtaatgaatattacagtggagatgtccaagttgggttcgacatc
ctacgaagttgcaagcatagaggaaaagaatattatgaaaatctttgcatgaaagctgta
aatcaatcaattggtagagcaattcggcacatcaatgactacgctgcaattttgttggtt
gacgcacgatatgcatccgatcctttaaaaagaagcttctctcacccaattaacaagctt
ccacagtggataaaagatcgtattgtacctgtaactggtaaatatggagaagcacagagg
ctgctgcaccagttcttcaaattcaacaagaagagagggtgtcggtaa
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