KEGG   Vitis riparia (riverbank grape): 117922762
Entry
117922762         CDS       T07274                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117922762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117922762
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117922762
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 117922762
NCBI-ProteinID: XP_034696862
LinkDB
Position
9:4838897..4860225
AA seq 387 aa
MSDSKSSPGDGANKTVKRSLPSWMSDRENGSKARGKRSVDGGGQEESKEGEKPEQAKGNG
GKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTL
LVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRKSNVPHEDK
NDEEAAPPSNSKMQVERGLRSKSTASKSGSNPAKDLFSPSEVKKWAIDDLHKTISWLDIQ
EEKPEPSEIKKIAAGGILTCLQDAIDSLEQKQDILEMTKEWNFIPRVVEELVKLESTRNS
HSSLSKADLYKHAVTCKEIYEAEFSSLDDDALANKKQPKTGSGEKGKKKMTKVTSSNAAG
YDSDETVEMTEEEIDLAYNTVASAICK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgtctgattcaaagtcaagccctggtgacggtgctaataaaactgtgaagagaagtctt
ccttcgtggatgagtgatagagaaaatggaagcaaagctcgtggaaagagatcagttgat
ggtggcggacaggaggaaagtaaggagggtgagaagcctgaacaagctaaaggcaatggt
ggcaaaagcaacaatagaccaggagcatccaatttgagtacctcgaacttctccaacctc
ctggaaggggtagtctttgtattatcagggtttgttaaccctgagcgtagtacactcagg
tctcaggccctggaaatgggagcagaatatcagcctgactggaactcaaattgtaccctc
ctggtctgtgcatttccaaatactccaaagtttcgtcaagttgaggcagattgtggaaca
attgtttcaaaggagtggctatcggaatgttacaaccagaagaagctcgctgatattgaa
atttatcttatgcatgctgggaaaccatggcggaaaagcaatgttccccatgaagacaaa
aatgatgaggaagctgccccacctagtaattctaaaatgcaagttgaaagaggattgcgt
tcaaagtcgactgcctccaagagtggatctaatccagctaaagatctcttttctccttca
gaagtgaagaaatgggctattgatgatttgcataaaaccatctcttggctggatattcaa
gaagaaaagccagagccaagtgaaataaagaaaatagcggctggagggatattaacttgt
ttacaagatgccatagactctcttgagcaaaagcaggatatcttggaaatgaccaaagag
tggaactttatcccacgggtggttgaggagctggtgaagcttgaaagcaccagaaacagc
cattcctctctctcaaaggcagatctctacaaacacgcagtcacctgtaaagaaatctac
gaggcggaattcagcagtttagatgatgacgcattggcaaataagaaacaaccaaagacc
ggtagtggagagaaggggaagaagaagatgaccaaagtcacgtccagcaatgcagctggc
tacgacagcgatgaaactgttgagatgacagaagaagaaatcgaccttgcttacaatact
gtagcatctgcaatttgtaaatag

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