Vitis riparia (riverbank grape): 117922773
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Entry
117922773 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117922773 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117922773
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117922773
Surveillance factors
Other surveillance factors
117922773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
117922773
NCBI-ProteinID:
XP_034696902
LinkDB
All DBs
Position
1:complement(22960728..22971802)
Genome browser
AA seq
1621 aa
AA seq
DB search
MAESKLDLPDDLISTKPSDQFWTATVVASGGNDDEKALMGLADESKDQLASESSIPLSPQ
WLYSKPNETKMDGKETRAPNSAALGNSTDPNQKEGWRLDASEDKKDWRKIATDTESNRRW
REEERETGLLGGRRNLRKVDRRVDTVSIRESIDSRALPTSERWHDGSNRNSVHETRRDSK
WSSRWGPEEREKESRTEKRPDVDKEDAHSDNQSFVGSNRPAPERDSDSRDKWRPRHRMEL
HSGGPTSYRAAPGFGIERARLEGSHVGFAIGRGRSIALGSTPVLRSSSAGPIGGAQFERN
GNVTGKLNLLDDTLCYPRGKLLDIYRRKKLDPSFATMPENMEETPHITLGDFIEPLAFVA
PDAEEEVILRDIWKGKITSSGVVYNSFRKGRTTENVTGVEDLESPKEKQGILPSITTKEI
ADTFPEGVNDGAYQDDDSGISFNYNMTKNMIDEMDANQGEGKYSVAGMDDMISTVSKGSS
LCGVSEMSGANRTASQLKVVENEHLANSDFAKHDKLDNITSAASFDIGCGLPDISNSIFA
LPSPKHSLSSNMQHLNSTGGANLLGRVIPPEDFSLHYLDPQGEIQGPFLGVDIISWFKQG
FFGIDLPVRLSDAPEGIPFQDLGEIMPHLKTKDGANSTDASSELEHAGILGANLEASSPA
PGPVPVPDIADTTALNDHHWSLSEFDGLSSQNFQQRKSEREGPLQLSYSDGQSFHDFSPQ
DEEIVFPGRPGSGGGGYPIGKPSRSTQDPLANPITYSSLPNELTEPVMANQNDNKLHQFG
LLWSELEGAHPTHAQPSNLSSSIGRLGPLGAMAGSTPDAEAFSDVYRRNILSNPNSYQDA
TATRHLSHIEQDSNRFDLAEQLMRQQFQQQLQQRQLQQQNLLSSHAHLNESLLEQVASRN
HMHHQRLANQPVPDLEHLMALQLQQQRQLQLQQDHQLQQQFHQKQMLLQEQKQAQARQAL
LEQLMHGQMHDPGLRQFPMDPVRTNNGLDQVLLKQHILHEIQQRSHHPSRHVDPSLDQLI
QTKFAQTPQDEHQRDIFELISHAKQSQMRSLEHQISHQEQLRARQLSMGLRQRMEMEEER
HMGTAWPFDETAHFLRSPAGTHRVQTAGFSPLDFYQQQQRAPLHEEQLSHLERNLSRQER
LQRGAYEPGSLAFERSMSMPTGAPGMNLDVVNAMAHPQGLDLPDPSSHMHSGGQLDPFSS
GSHPRHPQHPLVPNQFHVSHLDATEGHWSESNGHLANDWMQSQVQHLQLNAERQRRELEV
KKNSEDPNSWMSVGINDDKSKRLLMELLHKNWNHQSTESADTSNEVSYERREPSAHFSGS
SSSEHPFSLIPDRGTGLNNSFAAGSYGSNLVGQSHVNLADGQGSSLESNEKLPIRSYSGS
LFMDREFSDVEGKKRSSKVEGFTKGLIFENQEGMTEQAEVPMNAISQHSSLGIAGGGSGF
YDDKIGISGSFAEEIAKDRVSTILSKGQDNLLLQRPPVSRVSSSQEALSELASDPALRGK
IVPSGGPPDGGRQDLGGNPGNQGSEIPASGKKDGHLRRTSSSSEADVSETKFIDMLKSNA
KKPAPQEPQGAAGASDSTDGAQGGRSGKKKGKKVRPLDSAFLGFKVTSNRIMMGEIQRID
D
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagcaagctcgatctgcccgacgatctcatctctaccaagccctccgatcag
ttttggaccgctacagtggtagcctctggaggaaacgacgatgaaaaggcgcttatgggg
ttagctgatgagtcaaaagatcaactggcatcagaaagcagcatacctttgtctcctcaa
tggctttattccaaaccaaacgagactaagatggatgggaaggaaacgcgtgcaccaaat
tctgcagctctcggaaattccaccgatcccaatcagaaggagggttggcgtttagatgca
tctgaggacaaaaaagattggaggaagattgctactgacactgaaagtaaccgccgctgg
cgtgaagaggaaagagaaacaggcttacttggtggtagaagaaatctcaggaaggtggat
cgacgtgttgacactgtgtcaatccgggaatccattgacagtcgagctttgcccacatct
gagaggtggcatgatggtagtaaccgtaattctgtccatgaaacacggcgtgatagtaag
tggtcatctaggtggggtcctgaagaaagagagaaggaatcccgaactgagaaaaggcca
gatgtagataaggaagatgctcatagtgacaaccaatcttttgtaggtagcaaccgcccg
gctcctgagcgtgattcagattctcgagataaatggagaccacgtcacaggatggagctt
cattctggtgggccaacttcctaccgggctgcacctggatttggtattgagagagcacgt
ttggagggttcacatgtgggatttgctattggacgtggaaggtcaatcgctcttggtagc
acaccagttttaaggtcttcgtctgctggccccattggcggtgctcaatttgagaggaat
ggaaatgttactgggaaactgaatctcttggatgatactctttgctacccaaggggaaaa
cttcttgacatatatcgtcgaaaaaaacttgatccatcttttgctaccatgcctgaaaat
atggaggaaacacctcatataacactaggagactttattgaaccattagcttttgtcgcc
cctgatgcagaagaagaggttatccttcgtgatatatggaaaggaaaaatcacaagtagt
ggggtggtatacaattcatttagaaaggggagaacaactgaaaatgttacaggcgttgaa
gatctggaatcccccaaggaaaaacagggtatactcccttcaattacaaccaaagagatt
gctgatacctttcctgaaggtgtaaatgatggtgcataccaagatgatgacagtggcatc
tcctttaattacaacatgacgaagaacatgatagatgagatggatgctaatcaaggggaa
ggaaaatacagtgttgctggaatggatgatatgatatcgacagtttcaaaaggcagcagt
ttgtgtggtgtctcagagatgagtggtgccaacagaactgcttctcagctcaaagttgtt
gaaaatgagcatttggccaactctgattttgccaaacatgataagcttgacaacattacc
tctgctgcttcttttgatatcggttgtgggcttcctgatatttcaaattctatatttgct
ttgccctcccccaagcatagtctaagtagcaatatgcagcacttgaacagcaccggtggg
gccaatcttttgggaagggttatcccacctgaggattttagtttgcactacctggatcct
caaggggaaatacagggaccatttcttggggttgacatcatatcttggttcaaacaaggt
ttctttggaatagatttacctgtccgattgtctgatgctccagaaggaatacctttccaa
gatttgggtgagatcatgccacacctgaaaactaaagatggggccaatagcactgatgca
agttctgagctagaacatgctggcattttgggagcaaacttggaggcaagttcacctgct
cctggtcctgttcctgttcccgacattgcagacacaactgcattaaatgatcatcactgg
tcactgtctgagtttgatggtctctcatctcagaacttccagcaaagaaaatctgagcgt
gaaggtccattgcaactgtcatattctgatggtcaaagctttcatgacttttctccacaa
gatgaagaaattgtgtttccaggacgacctggcagtggtggtggtggttatccaattggg
aaaccttctagaagcactcaagatcctttggcaaatcctattacttactcttctcttcca
aatgaattgacagaacctgttatggcaaatcagaacgacaataagttgcaccaatttggc
ttgttgtggtctgagcttgaaggtgctcatccaacgcatgcccagccatcaaatctgtct
tccagcattggaaggcttggtccccttggtgcaatggctggttcaacccctgatgcagag
gcattctctgatgtttatcgaagaaatatactttccaaccccaactcatatcaagatgct
acggctactcgccatttgtcccacattgaacaagactccaaccgttttgatttagctgag
cagcttatgcgccaacaatttcaacaacagctccaacagaggcagttgcaacagcaaaat
ctgttatcttctcatgcccacttgaatgaatctcttctagaacaagtggctagtcggaat
cacatgcaccaccagcgcttggccaatcaaccagtgcctgatctggagcacttgatggca
cttcagcttcaacaacaacggcagcttcagctacaacaagatcatcaattgcaacaacag
tttcatcaaaagcaaatgttattgcaggagcaaaagcaggcacaagctcgacaagcactt
cttgaacagttgatgcatggtcaaatgcacgatcctgggcttaggcagttccctatggat
cctgtcagaaccaacaatggtcttgatcaggttttactaaagcagcacattctacatgag
atacaacagcgttcccaccatccttcgaggcatgttgatccatctctagatcaacttatt
caaacaaaatttgctcaaacaccacaagatgagcatcaacgtgatatatttgaactcatt
tcacatgcaaagcaatcacagatgcgttctttggaacaccagatttcccaccaagagcag
ctccgagcaaggcaattgtcaatgggattgaggcagcgtatggaaatggaagaagaaagg
cacatgggtactgcctggccatttgatgaaactgcacattttctcaggtctcctgctggt
actcatcgagttcagaccgctgggtttagcccattagatttttatcagcaacagcagagg
gcacctttgcatgaagagcaattgagtcaccttgagcggaatctttcaagacaagagcga
cttcagcggggggcctatgagcctggctcgctggcctttgagcggtcaatgtctatgcct
actggtgctccagggatgaacctggatgttgtgaatgctatggctcatcctcaaggttta
gatctgccggatcctagctcacatatgcactctggtggtcaattagatccattctcatct
ggttcacatcctcgtcaccctcagcaccctctagttcctaaccaatttcatgtttcacat
ttggatgcaactgaaggccattggtctgagagcaatggacatttggcaaatgattggatg
caatcccaggttcaacatctgcagcttaatgctgagcgacagagaagggagttggaagtt
aaaaagaattctgaagatcctaattcatggatgtctgttggaatcaatgatgacaaatca
aaacgcttactcatggaactgctccataagaactggaaccatcagtctactgagtcagcg
gacacaagcaatgaagtttcttatgaaagaagggaaccttctgctcacttttctgggtca
agctcttcagaacatccattcagtcttatcccagaccgaggaacaggtctaaacaactcg
tttgcagcaggatcttatggttctaatttggtcgggcaatctcatgttaatttagctgat
ggacagggtagcagtttggaaagcaatgaaaaattgcccattagatcctattctggatca
ttgtttatggacagagagttctcagacgtggagggaaagaagcgtagctccaaggttgag
ggttttacaaaggggctaatttttgagaatcaagaaggaatgacagagcaagcagaggtt
ccaatgaatgccattagccagcattcttcacttggcattgcgggtgggggttctggtttc
tatgatgacaagattggtatatctggttcatttgcagaagagattgctaaggatcgggtt
tcaaccatcctatcaaaagggcaagataatcttttgctacaacgtccacctgtctccagg
gtttcgtcatcacaggaagcattgtccgaattggcatctgatccagctctcagagggaaa
attgttccaagtggtggtcctcctgatgggggaagacaagatttgggtgggaacccaggg
aaccaaggttctgaaattccagcctcaggcaagaaggacggccatcttcggcgcacttca
tcttccagcgaagctgatgtatcagaaacaaagttcatagacatgctgaagagtaatgcc
aagaaaccggcaccacaggagccccaaggggcggcaggagcctcagactcaacagatgga
gcacaagggggacgaagtggcaagaagaaaggaaagaaagtgaggcctcttgattcggcc
ttcctgggtttcaaggtaaccagcaaccgcatcatgatgggtgagatccaacgcatagat
gattaa
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integrated database retrieval system
