Vitis riparia (riverbank grape): 117923124
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Entry
117923124 CDS
T07274
Name
(RefSeq) ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117923124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117923124
04147 Exosome [BR:
vri04147
]
117923124
04090 CD molecules [BR:
vri04090
]
117923124
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117923124
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117923124
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117923124
CD molecules [BR:
vri04090
]
Proteins
117923124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_15
SbcC_Walker_B
AAA_30
DLIC
DUF815
Motif
Other DBs
NCBI-GeneID:
117923124
NCBI-ProteinID:
XP_034697257
LinkDB
All DBs
Position
10:complement(14879723..14884807)
Genome browser
AA seq
1279 aa
AA seq
DB search
MNNDGGETTAKRLDQQKVTLYKLFSFADQSDVVLMTVGTISGMANGCSRPLMTVMLGKTI
NKFGSTDQSHIVHELSKICLVLLYLAVASGIAGFLRCNRYSTLINTSEYFTETSSWMVTG
ARQANRIRSLYLDTILRQDIGFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLVSN
FIGAFVFAFIIGWRLTLVLLPTVPLIIIAGAAMAAVISKMSSYGQVAYAEAGNVVEQTIG
AIRTVAAFTGEKHAMEKYNRRLKVAYAATVKQGLASGFGVGVALLIVFFSYALAIWYGSK
LIIDKGYDGGKIVNVLFCVIGGGMALGQASPCLSAFGAGQSAAYKMFETIKRKPKINAYD
TSGVVLEEIMGEIELKDVYFKYPARPEVQIFSGFSLNIPSGTTAALVGQSGSGKSTVISL
LERFYDPEAGEVLIDGVNLKKINLRWIRGKIGLVSQEPILFAATIKENISYGKEKATDEE
IRTAIKLANAAKFIDKMPTGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATS
ALDAESERIVQDALQNIMVNRTTVIVAHRLTTIRNADNIAVVHQGKIVEQGTHMELIRDP
DGAYSQLVRLQEGHNQVEDAQSRVSKSSARDNARRSSRSRSLSSQISIISRDSPSVHHSY
SLSSGIPDPTGIIEIEFGGKESSTTQGEAENKKRRKVSLIRLAYLNKPETPVLLLGSIAA
GFHGIIYPVFGLLISTAIKIFYEPPNELKKDSRAWAFMFIGLGVLAFIALPLQNYLFGIA
GGKLIQRICSLSFEKVVHQEISWFDDPANSSGSVGARLSTDASTVRSLVGDTLALVVQNL
VTVAAGLVISFTANWILALIILAVLPLMGFQGYLQTRFLKGFSADAKVMYEEASQVANDA
VSSIRTVASFCAEKKVMEMYQQKCEGPMKHGVRLGLVSGVGLGFSFFSTYCTNAFCFYIG
AVLVQHGKATFSEVFKVYFALTFLALAISEATAMAPDTNKAKDSTASIFELLDSKPKIDS
SSNEGTTLSIVKGDIELQNVSFRYSTRPDVQIFRDLCLSIPSGKTVALVGESGSGKSTVI
SLLERFYNPDSGHILLDGMEIQKFKLSWLRQQMGLVNQEPALFNETIRTNIAYGKQGEAA
EEEIVAATRAANAHNFISALPQGYDTSVGERGLQLSGGQKQRIAIARAILKDPRILLLDE
ATSALDAESERVVQDALDRVMVDRTTVVVAHRLTTIKGADVIAVVKNGEIAEKGTHDVLM
DIRHGAYASLVALHMASST
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgatggaggagaaactactgccaaaagactcgatcaacagaaggttacactc
tataaactcttctcatttgcagaccaaagtgatgtggtgttgatgactgttgggaccata
agtggcatggcaaatgggtgctccaggccgctcatgacagtcatgttgggcaaaaccatc
aataaatttggatccaccgatcaatcccatattgtccatgaactatcaaagatatgttta
gtgcttttgtaccttgcggttgcttcgggcatagcggggtttctacgctgtaatcgatac
tcaacacttattaatacgtctgaatacttcacagaaacttcaagttggatggtgactgga
gcaagacaggccaaccgcatccgaagtttatacttggatacgatactaagacaggacatt
ggattctttgacactgaaacaacaaccggagaggtcattgggaggatgtctggggatact
attctcattcaagatgcaatgggtgaaaaggttgggaagttcatacaactcgtgtcaaat
tttatcggtgccttcgtatttgccttcataataggatggcgtctcaccctagtcttgctt
ccaactgttcctcttattatcattgccggagcagccatggccgccgtgatatcaaaaatg
tcaagttatggacaagttgcttatgcggaagctggaaatgtagtggaacaaacaatagga
gcgatcagaactgtggccgccttcaccggagagaagcatgccatggaaaaatataatagg
aggctcaaagttgcttacgctgctactgttaagcaagggctagcctcaggctttggagtt
ggagtggctctactaattgtcttcttcagctatgcacttgccatatggtatgggtccaaa
ttgatcattgacaaaggatacgatggtggaaaaatcgtgaatgtcctgttctgtgtcatt
ggtggaggaatggcattgggccaggcatccccatgtctgagtgcttttggagcagggcag
tctgcagcatacaagatgtttgagacgatcaaacgaaaaccaaaaatcaacgcctatgat
actagtggggttgtattggaagaaatcatgggagaaattgaactcaaagatgtgtacttt
aaataccctgcgaggccagaagtgcagatattttctggtttctcattgaacattccaagt
gggacaactgcggctttagtcgggcagagtggaagtggaaagtcgacagtgatcagtctg
ttggaaagattctatgatcccgaagctggtgaagtactcatagatggtgtcaatctaaag
aaaataaatctcagatggatcagggggaagattgggcttgtcagtcaggaacctatcttg
tttgcagctactataaaggaaaacatatcctatggaaaggaaaaagcaactgacgaggag
attagaacagcaattaagcttgcgaatgctgcaaaattcattgacaagatgcccacggga
cttgacacaatggtgggtgagcatggaactcagctatctgggggacagaagcaaagaatt
gcaattgcaagagccattttgaagaacccaagaatccttcttcttgatgaagcaacaagt
gcactggatgctgagtctgaacgcattgtccaagatgcactacagaacatcatggtgaat
cgaaccactgtaatcgtggctcatcggttgacaacgattaggaatgctgacaatatagca
gtggtgcatcaggggaaaattgtggagcaaggaactcacatggagttgatcagagatcct
gatggggcttactcccagctagttcgcctccaagaaggacacaatcaggttgaagatgcc
caatcaagggtaagtaagagctctgcaagagacaatgccagacgcagttcaagaagccgt
agtttgtcttctcagatatccataattagtagagattcaccaagtgtccaccattcttat
tcacttagctctggcattcctgatccaactggtatcattgaaattgaatttggtgggaag
gagagcagtactacacaaggtgaagcagaaaacaagaagagacgcaaagtttcactcata
cgactggcctacctcaacaagcctgaaacgccagttttgctacttggctccattgctgca
ggtttccatggtataatctacccagtatttggcctcctgatctcaacagccattaagatc
ttctatgagcctccgaatgagctaaaaaaggattccagggcttgggcattcatgtttatc
ggtctaggtgtcctggcttttatagctctacctttgcagaattacttattcggaattgca
ggtggaaaattgatacaacggatttgttccttatcttttgagaaggttgtgcatcaggaa
atcagttggtttgatgacccagcaaattcaagtggttctgtgggtgcaaggttatcaaca
gatgcttcaacagtccgcagtctagtgggtgatacattagccctggttgtccagaacctg
gtgacagtcgcagcaggacttgtcatatcattcacagctaactggatattagcactaata
atattagctgtgttacccttaatgggttttcaaggatacctacaaacaaggttcctaaag
ggtttcagtgcagacgcaaaggtgatgtatgaagaagcaagtcaagttgcaaatgatgca
gttagcagcatcagaacggttgcatcattttgtgctgagaagaaggtgatggagatgtac
caacaaaaatgtgaaggcccaatgaagcatggagttcgattgggacttgtaagtggcgta
ggtttaggcttttctttcttttcaacctactgcacaaatgccttctgtttctatatcgga
gctgttcttgtgcaacatgggaaagcaactttctcagaagtcttcaaggtatactttgct
ttgacatttttggcattagcgatttctgaagctactgccatggctccagacaccaacaaa
gccaaggattcaactgcttctatctttgaacttctcgacagcaagcccaaaattgattca
agcagcaatgagggcacgaccttgtcgattgtgaagggcgacattgagttacaaaatgtc
agctttagatattcaacaaggccagacgttcaaattttcagggacttgtgcttgagcatc
ccctctggaaagactgttgctctagttggagagagtggtagtggaaagtcgacagtaatc
agcctactagagagattctacaatcctgattccggtcatatattactggatggaatggaa
atccaaaagttcaaactaagctggctgagacagcaaatggggttggtaaatcaagagcct
gcactcttcaatgaaacaatccgcacaaacatagcatatggaaaacagggagaagctgct
gaggaggagatcgttgcagccacaagagcagccaatgcccacaacttcatatctgcatta
ccccaaggctatgacacctcagttggggaacggggactgcaattatcaggcgggcagaag
cagcgaatagccattgcaagggcaatactgaaggacccaaggatccttcttctagatgag
gcaaccagtgcccttgatgcggagtcggagcgtgtggtacaagatgccttggatagagtc
atggttgacagaacaactgtggttgtggctcaccgccttaccaccattaaaggagctgat
gtaattgcagtagtgaagaatggtgagattgcagaaaagggaacacatgacgtactgatg
gacataaggcatggggcctatgcgtctctggtagcacttcacatggcttcctcaacttga
DBGET
integrated database retrieval system
