Vitis riparia (riverbank grape): 117923274
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Entry
117923274 CDS
T07274
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117923274
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117923274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
GDH_C
DUF4143
Trm112p
Motif
Other DBs
NCBI-GeneID:
117923274
NCBI-ProteinID:
XP_034697388
LinkDB
All DBs
Position
10:complement(16717901..16723143)
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AA seq
530 aa
AA seq
DB search
MEASGSCKGCKKEALIRDDVTGSLVCSSCGLVQPFDNYDPQLGGLNGPQGTFVRVGTTGT
GSSLNYKDKKIFEAQKLIDDLLFKLGFSSEKSNEVRTMVATITEGEFGQGDWLPVLVGAC
SYVVRRQSNRALSIAEVGSVIGSDVYELGQMIRRVVEFLNLKLPDIDIVNSLELAFGQCG
SLNRVSKDKVNKMLKQGTFLVQCAVKWFLTTGRRPLPMIAAILMFVAELNQVDVRIENIA
NEIHAGVATTRLRYKELSEALVKVAQALPWGKDVSTKNIIKNAPFVIQYMEMKSRLLPGK
RRENLEGGGFDLDGVVSDCLNKEFDYIPQGYDMENDSQYFEADSESGLDIDNSDKLKLSH
ECLSVIYSRFLNEDSRVNPVGENGGDHSRKRRREYDPPAMNEWWNGKSNMSKKLLLEQIL
EKDVGLDALPPSFVSGCLAYEQRREKINAAKLRISKIMYPSKANMGDTEEFSSEEHLHAK
KKRRKTKKNGIDWEDFVIETLLLHHVKEDEIEKGHYNTLLDLHVFNSGCL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctccggctcctgcaaaggttgcaaaaaggaggctttgattcgggacgatgta
acgggctcgttggtgtgctcatcttgtggactcgtccaacctttcgacaactatgatccc
caattgggtggcctcaatggtcctcagggtacattcgtccgtgttggcacaacgggcacc
ggcagctccttgaactacaaggacaagaaaatctttgaagcccagaaactcatcgatgac
ttgcttttcaagttagggttttcgagtgagaagtcgaatgaggtcaggacaatggttgcc
accattactgaaggagagttcggtcaaggcgactggcttcctgtccttgttggtgcttgc
tcgtatgttgtaaggcggcagagcaatcgagcattgtctattgctgaagtggggtcggtg
attggttccgatgtttatgagctagggcaaatgattcgccgcgttgttgaatttttgaat
ttgaaattgccggatattgacattgtgaattccttggaattggcgtttggacaatgtggg
agtttgaatagggtttccaaggataaggtgaataaaatgcttaaacaagggacatttttg
gtgcaatgtgcagtgaagtggtttttgacaacggggcggaggccgctgccaatgattgca
gccattttaatgtttgttgcagaattgaatcaagtcgatgttcggattgagaatatagca
aatgaaattcatgctggagtggctacaactaggttgaggtataaagagctttcagaggct
cttgtgaaagttgcccaagcattgccctgggggaaggatgtttccactaagaatataatc
aagaatgcaccttttgtgattcagtatatggagatgaagtcgaggttgctgcctgggaaa
aggagggagaatttggagggtggcggatttgatttggatggtgttgttagtgattgtttg
aacaaagaatttgactatattccacaaggttatgacatggaaaatgactctcagtatttt
gaggcagacagtgagagtgggttggacattgataactcagacaagctcaagctttcgcat
gaatgcttatctgtgatttattccaggtttttgaatgaggattctcgagttaaccctgtt
ggagagaatggtggggatcacagcagaaaaaggaggagagagtatgatcctcctgcaatg
aatgagtggtggaatggaaaatcaaatatgagtaaaaagcttttgcttgagcagatattg
gagaaagatgtaggattggatgctttgcctccatcttttgtttctggatgcttggcatat
gaacagaggagagaaaagataaatgctgctaagttgcgcatcagtaagattatgtatcca
tcaaaggctaatatgggtgacacggaagagttttcctctgaggaacatctacatgctaag
aagaaaaggaggaaaacaaaaaaaaatggaattgattgggaggattttgttattgaaacc
cttctccttcatcatgttaaagaggatgaaattgagaaggggcactacaataccctgttg
gatctgcatgttttcaactctgggtgtttgtga
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