Vitis riparia (riverbank grape): 117923360
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Entry
117923360 CDS
T07274
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117923360
Enzymes [BR:
vri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
117923360
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117923360
NCBI-ProteinID:
XP_034697509
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Position
10:complement(23076748..23078430)
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AA seq
397 aa
AA seq
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MAYTALFLVLSCTLAYYASTLQAYSSLDYTPQTLTSYVPSSSKSSTKKVMNPIDSCWRRK
ANWASNRRALADCAVGFGKGAMGGKYGATYVVTIPSDDPVNPKPGTLRYGVIQTKPLWIV
FAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISIHDCKPGKSG
LVRSTTMHVGHRLGSDGDAISIFTSSHVWIDHCYLASCTDGLIDVIHASTAITISNNYFS
HHDKVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPRVRFGYAHLANNKYDEWEMYAI
GGSANPTILSEGNHFTAPDNANAKEVTKREVKSGWKNWKWRSSKDKFVNGAYFVQSGWGS
CAPLYSRSQAFSVADGSMVPALTSDAGPLGCSAGKPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcctacacggcccttttcctagtgctttcctgcactctagcctactacgcttcaact
ttacaggcttactcatcactagactacacccctcaaacgttaacaagctatgtgcctagc
agttctaagtcgtccactaaaaaagtcatgaacccaatagactcttgctggcgcagaaag
gccaattgggcctctaatcgccgcgccttggctgactgcgctgtaggctttggtaaaggc
gcaatgggaggaaagtatggcgccacgtatgtagtcactatcccttctgatgatccggtg
aatcccaaaccaggcacgcttcgttatggtgtaattcagactaagccgctttggatcgtt
tttgctaaggacatggtgattacgctgaaaaatgagttgattatgaatagtttcaagact
attgatgggaggggagcgaaggtggagattgcttacgggccgtgcatcactatacaaggt
gtgagccatgttattatacatgggattagtattcatgactgtaagcctgggaagtctggc
cttgttaggagtactacaatgcacgttggtcatcgcctcggctctgatggtgatgcgatc
agtatattcacttcttcgcatgtttggattgaccattgctatctcgctagctgcaccgat
ggccttatcgatgttattcatgcgtctactgctatcaccatttctaacaactacttctct
caccatgataaagtaatgctgtttgggcacgatgatcacttcactgcagataaagtcatg
agtgttacagtcgccttcaaccattttggcactggtctagttcaaaggatgccaagggtt
agatttggctatgcccaccttgccaacaacaagtatgatgaatgggagatgtatgccatt
ggtgggagtgctaatccaaccatcttaagcgaagggaaccactttactgctcctgacaat
gccaacgccaaagaggttaccaagagagaggttaaaagtggttggaagaattggaaatgg
aggtcctctaaggataaatttgtgaatggtgcatactttgttcaatctggatggggaagc
tgtgccccgctttactctcgatcccaagcattttctgttgctgatggttcaatggttcct
gctttaacatctgatgcgggtcctttgggttgttctgctggcaaaccatgttga
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