KEGG   Vitis riparia (riverbank grape): 117923440
Entry
117923440         CDS       T07274                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vri04812]
    117923440
Cytoskeleton proteins [BR:vri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     117923440
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_WDR75_2nd WD_LRWD1
Other DBs
NCBI-GeneID: 117923440
NCBI-ProteinID: XP_034697614
LinkDB
Position
10:18460440..18481306
AA seq 806 aa
MAKRGYKLQEFVAHTTNVNCLNIGKKACRLLISGGDDHKVNLWAIGKPTSLMSLCGHTSP
VESVTFDSAEVLVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFHPFGEFFASGSL
DTNLKVWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRT
LFCGLDDSLKVYSWEPVVCHDAVDMGWSILGDICIHEGKLLGCSYYRNSVGVWVADISQI
EPYGSGLLSKKNGCVERKFDLQESHSVEKVGSSVRSTSGLRSMSPDYDTKEIKNIYVDSS
GGNSVASQKVRSFNTPKVLFPSDSEEITNLPTQKHSPGVGLHAKTQGRAITRSFVVPSIV
TRDNSDGKDLANSRRESITPARANTGMSLKTSHIRRPLNSKYEAERLLMAVESGSFDSMP
NDLDSAMKQNFHSRLVVDDEASESCEEKNSNITSVAEKFEKVLSPQASSNQENSNESLND
NKRINSIKIVNGVAVVAGRTRSLVERFERREKFNSNEDQTTNVSSDMMPERQERFNSNDD
QTTKVSSEMMPETARTSPMLKGQPQISGRESTAASEENTIKDVIQNHDLFISTLRSRLTK
LQVVRHFWEQNDVKGAINALRKLPDHSVQADVVSVLMEKMEILTLDLFSCLLPVLMSLLD
SNLERHANLSLDMLLKLVAVFGPVIHSAISAPPAIGVNLQAEHRRECCNQCFIQLQKIQK
NLPVIIRRGGLLAKSAQELNLVLQES
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggccaagcgcggatataagctgcaggaatttgtggctcatactacaaatgtgaactgt
ctaaatattggaaagaaggcgtgccgacttcttatatctggaggagatgatcataaagtg
aatctttgggcgatcgggaagcctacttctttaatgagcctgtgtggtcacacaagtcca
gttgaatctgtaacttttgattcagcagaggttttggtggctgctggagcttctactggt
gtgattaagctgtgggacttggaagaagcaaagatggttcgcactcttactggacacagg
tccaattgcactgctgtcgaattccatccatttggggaattttttgcttctggttcgctt
gacactaatctaaaagtctgggacatcagaaagaaaggatgcattcacacatacaagggc
catactcgaggaattagtactattagattcactcctgatggtcgttgggtagtttctggt
ggattcgacaatgttgtaaaggtatgggatcttactgctggaaagctcttgcatgatttt
aaattccatgaaggacatattcgatccatagacttccatccccttgagtttcttttggcc
acaggttcagcagatagaactgtaaaattctgggatttggaaacctttgaactgattgga
tctgccagacctgaggctactggagtacgctcaattacctttcaccctgatggaagaaca
ctattttgtggactagatgatagtttgaaggtttattcatgggagcctgtagtttgtcat
gatgctgttgatatgggttggtcaatcctgggtgacatctgtattcatgaaggaaaactt
ttgggttgctcatactatcgaaactctgttggagtttgggtggcagatatttcgcaaatt
gagccatatggatctggtttgttatccaagaaaaatggctgtgtggagaggaaatttgat
ctccaggaaagtcattctgttgagaaagtagggagtagtgtaagatctacttcagggttg
cgtagcatgtctccagattatgacactaaagagataaagaacatatatgtggattcttct
ggtggaaactctgttgcttcacaaaaagtgaggtcttttaacactcccaaggttttattc
ccatcggattccgaggaaataacaaaccttccaactcagaagcacagtcctggagtaggc
ttgcatgccaagactcaggggcgagcaattactagatcatttgttgtgccaagtattgta
actcgggataactctgatggaaaggacctagccaattctagaagagaatctatcacccct
gcaagagctaatactggcatgtcactcaagacgtctcatatacggaggcctttgaatagc
aaatatgaggcagagaggctgttgatggctgttgaatctggatcttttgacagtatgcca
aatgatttagatagtgcgatgaagcaaaacttccattccaggcttgtagtagacgatgaa
gctagtgaatcttgtgaggagaaaaattctaatatcacaagtgttgctgagaagtttgaa
aaagttttatcaccacaggcatcctctaatcaggaaaacagcaatgagtccctcaatgac
aacaaaagaataaactccatcaaaattgtcaatggagtggcagttgtagcaggaagaaca
cgaagtttggttgagaggtttgaaagacgagaaaaattcaatagcaatgaagatcaaaca
actaatgtttcctccgacatgatgcctgaaagacaagaaaggttcaatagcaatgatgat
cagacaactaaagtttcctctgaaatgatgcctgaaacagctagaacatctcccatgctg
aagggacaaccccagatctctggaagggagtcaacagctgctagtgaggagaataccatc
aaagatgtaattcaaaatcatgatttatttataagtacacttcgatcccgcctgacaaaa
ttacaggtggtgcggcatttttgggaacagaatgacgttaagggtgccatcaatgccttg
aggaaattgcctgatcattctgtgcaagcagatgtggtcagtgttctcatggagaaaatg
gaaattctcacattagatctattttcttgtttgctgcctgtgctcatgagcttattggat
agcaacttagaaaggcatgcaaatctctcacttgatatgctactgaagcttgtagcagtc
tttgggcctgtaatacactcagccatttctgctcctccagctattggtgtcaatcttcag
gcagagcacaggcgtgaatgttgcaatcagtgctttatccagctacagaagatccagaag
aatcttccagtaattataaggaggggtggtttgctggcaaaatcagctcaggaattgaat
ctagtgcttcaagaatcataa

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