Vitis riparia (riverbank grape): 117923753
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Entry
117923753 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vri04812
]
117923753
Cytoskeleton proteins [BR:
vri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117923753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
PAN2_N
Motif
Other DBs
NCBI-GeneID:
117923753
NCBI-ProteinID:
XP_034698081
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All DBs
Position
10:214587..242139
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AA seq
797 aa
AA seq
DB search
MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGXDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSELLVAAGAASGTIKLWDLEEAKIVRTLTSHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETAGVRCMTFNPDGK
TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSR
IEPYAVGNVTRLNGHSESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRL
SVSQNSDPVDKETKCLASTGSVPGTPQRVNLNTGPKTTLASSTTAPKRISAKAHSTANVS
AFNKSDVIPVIVPRTNVRLDQAAESRKEVGVSGRTIPFSLQSRTSDFRKSPNRRDELERP
TVSVPSENAGSKATDLSTVADRNIFPAVKCSTPGISAAERNVKDDRCIGSGRQEMNSTME
PPPNYHHENYDTRVHRANRDACSIEVQKGGRTRSLVANWEKREISPTYEGHTSSNFSGTV
SASNMLPFSARGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWER
NDIKGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGIS
LEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGG
SVAKLAQELNLALLEVL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaacgtgcttacaagctacaggaatttgtagcacactcttccagtgtaaac
tgtctcaagattgggaggaagtcatccagggttcttgtcactggtggangagatcacaag
gtgaatctttgggccatcggcaagcccaatgccatactgagtttgtctgggcacacgagt
ggaattgattcggtaagttttgactcttcagagctgttggtggctgcaggagcggcaagc
ggcacaatcaagctatgggatttggaggaggcaaagattgttcgcacgcttactagccac
agatcaaattgcatatctgtggacttccatccatttggggagttctttgcatctggctct
ctggacacaaatcttaagatttgggatatccgaaagaaggggtgtatccacacttataag
ggccatacacgaggggtcaatgcaatcagatttacaccagatggccgctgggttgtgtct
ggtggagaggacaacactgtgaagctgtgggatctgactgctggaaagttgttgcacgat
ttcaaaagtcatgagggccagcttcagtgcatagattttcatcctcatgaatttctgctg
gcaacaggttcagctgatagaactgttaaattctgggaccttgagacttttgagttgatt
ggttcagctggacctgagaccgctggagtgcgttgtatgactttcaatcctgatgggaaa
actctactctgtgggttgcatgaaagtctgaaagttttttcatgggaaccaataagatgc
catgatgctgtggatgtggggtggtctagattatcagatcttaacattcatgagggaaag
cttctgggctgctcatacaaccaaagttgtgttggagtctgggttgtagatctctcgcgc
atagagccatatgcagttggtaatgtgactcgattaaatggtcattcggaatctaaatct
agttcaagtgggaatttgtcagtactgacagaaaacaccacaaaggctagtttgggcagg
ttatccatttcacaaaatacagagctgattatgaaggaaacaaaatctctgggaaggctg
tctgtctctcaaaattcagatcctgttgacaaggagacaaaatgtttggcatccacagga
agtgtacctggtactcctcaaagggtcaatttaaacactggtccaaaaacaactttggca
agttcaacaacagctccaaagaggatttctgcaaaggcccattcaacagcaaatgtttca
gcctttaataaatcagatgtgatacctgtaattgtccccagaactaatgtgaggttggat
caggcagctgaatccagaaaggaagttggtgtttctggaagaacaattccattctctttg
cagtcaagaacaagtgatttccggaagtctccaaatagaagagatgaattagagagacca
actgtttctgtcccatctgaaaatgcaggttccaaagctactgatcttagcacagttgca
gataggaatatttttcctgcagttaagtgctcaactccaggaatttctgcagctgaaaga
aatgtgaaagatgataggtgtattggatctggcaggcaagaaatgaattcaacgatggag
ccacctcctaactaccaccatgaaaattatgacacacgggtgcatagagcaaacagagat
gcatgctctattgaagttcaaaaaggaggaagaacccgttcgcttgttgctaactgggag
aagagagaaatatctcctacttatgagggacatacatccagtaatttctctgggactgtt
tctgcatctaacatgctcccatttagtgcgagaggatatactccatctactgaaaaggaa
gcagtgcctgccagtgatgaagatgctattacagatataatggaacaacacggtcaattt
gttggctctatccagtctcgcttatccaagttacaggtagtccatagattttgggaaagg
aatgacattaagggggctattggtgcgatggaaaagatggctgatcattctgtctttgct
gatgtaatcagcattttgagagaaaaacctgatgttgtgacactggaaatttgcacttct
ctcctgccactcctcacgagtcttcttgaaagtgagatggataggcatttaggcatttct
cttgagatgctccttaagctggtcaggatatttggttcagtgatccattcaactttatca
gcatcatcatctgttggtgtagatattcaggcagagcaaagactggagcgctgcaatctc
tgctttattgagcttgaaaagatcaaacactgcctgcctgccctaaccagaagaggaggt
tcagttgcaaaattggcgcaggagctgaatctagcacttctagaagtactatga
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