Vitis riparia (riverbank grape): 117923788
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Entry
117923788 CDS
T07274
Name
(RefSeq) protein argonaute 2-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117923788
03036 Chromosome and associated proteins [BR:
vri03036
]
117923788
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117923788
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117923788
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117923788
microRNA pathway
RISC loading complex
117923788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117923788
NCBI-ProteinID:
XP_034698127
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Position
10:4787680..4793347
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AA seq
971 aa
AA seq
DB search
MEGRGGRGRGRGRGDGGGGGSGWRGRGRGRGWGQPTQPWRPSNPVGQPVQRWVPNPVQQP
QPPTIAPATAAPVGQPVQLWVPNPVQQPQRPTFVPATAATVELPTSSHHDKEAGDKRIPM
RRPDKGGTNAVRSVSLRVNHFPVKFKSNRLIMHYDVDIKPEAPPKGRAVKISKATLYMIR
EKLCVDHPSQFPTSKIAYDGEKNIFSAVELPTGKFKVEISGGEEMKVCLFIVTINLVKQL
ELQKLSDYLSGVLSFVPRDILQGMDVVMKENPARHMISSGRSFYQFKDSGKDELGYGIIA
SRGFQHSLKPTAQGLSLCLDYSVVPFFNPISVLEFLKEHVRGFSLREFKRYRSKVEATLK
GLKVRVTHRNTGQKFIIAGLTSQDTRNLSFLAEDPERKVLPKKVILVDYFYEKYGKDIVH
KDIPCLDVGKNNRNNYVPMEFCTLVEGQRYTKEILDKDAAQGLKREQLPTPVVRESKICA
MVQANDGPCGGGIIDSFGIDVNKNMTALAGRVIGPPELKLGDPSEGKVNKLTVDKDKCQW
NLVGKLVVKGIPVDHWAVVDFTAYEQYNRLNTGQFISGFIRRCGKLGIQMRNPLFCETAN
MHAFREFPVLRELLDKVYKKARCQLQILVCVMARRDAGYGYLKWFSETRLGMVTQCCLSG
PANKVSDQYLANLALKLNAKLGGSNVELIERLPRFEGEGHVMFIGADVNHPGSQNTTSPS
IAAVVATVNWPAANRYAARIRPQAHRMEKIQNFGAMCLELVEAYVQANKVKPEKIVVFRD
GVSEGQFDMVLNEELLDLKRAIQGGNYCPTITLIVARKRHLTRLFPKVNDRSFNGNVPPG
TVVDTTVVHLSEFDFYLCSHYGTLGTSKPTHYHVLHDEHRFSSDQIQKLIYNLCFTFARC
TKPVSLVPPVYYADLAAYRGRLYYDAIVAEVGASAATSSSVASPSSSSAGAWPNDGLYRL
HGALENMMFFI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgtggaggaagaggaagaggaagaggaaggggagatggtggtggaggcggt
tccggatggagagggagagggagagggagagggtggggacagcccactcagccgtggagg
ccctccaatccggtcggacagccggttcaacggtgggttcccaacccggtccaacaacca
caacctccaacaatcgcgccggcaacagctgctccggtcggacagccggttcaactgtgg
gttcccaacccggtccaacaaccacaacgtccaacattcgtgccggcaacagctgctacg
gtggagttgccgacttcttctcatcatgacaaagaagctggggacaagcgtattcctatg
agaaggccggacaaaggtggcaccaatgctgtcagatctgtttcacttcgtgtgaatcat
tttcctgtcaagttcaagtctaataggctcataatgcattatgatgttgatattaaacca
gaggctccgcccaagggtcgtgcagtaaagatatcaaaggccactttgtatatgatacga
gaaaagctctgtgttgatcacccctcacagtttcctacatcaaagattgcttatgatggt
gagaagaacatttttagtgctgttgagcttcccactgggaaatttaaggtggagatctct
ggaggagaagagatgaaggtttgtttgttcattgtcactataaatctggtgaagcaactt
gagcttcaaaagttgagtgattacttaagcggggtactctcctttgttccccgtgatata
ttacaaggtatggatgtggtaatgaaggagaatcctgctagacatatgatatcttctggt
cggagcttttaccaatttaaagactcaggaaaagacgagctgggatatggtattatagct
tctagaggatttcaacatagtctcaaacccactgcccagggtctatccttgtgcttggac
tactcggttgtgccattttttaatccaatttcggttttagagttcctaaaggagcatgtt
cgtggcttctccttacgagagtttaagagatacaggagtaaggttgaggctaccttaaag
ggattgaaagttagagtgactcaccgtaatacaggtcaaaagttcattattgcaggttta
actagtcaagacacgcgaaatctgtcatttcttgctgaagatccagaacgcaaagttttg
ccaaagaaagtaatccttgttgattatttctatgaaaagtatggcaaggatattgtgcac
aaggatattccctgcttagatgtgggaaaaaacaataggaataactatgtaccaatggaa
ttctgcactttggttgaggggcagaggtatacaaaagagattttggataaagatgctgct
caggggctgaaacgtgagcaacttcctacaccagttgttagagaaagcaaaatatgtgca
atggtgcaggcaaacgatggaccatgcgggggaggtatcattgacagttttggcattgat
gtaaacaagaacatgacagcacttgcaggacgagtcattgggccaccagagttgaagtta
ggagacccttccgagggcaaggtgaacaagttaactgtggataaggacaaatgccagtgg
aatttggttggaaaattggtcgtgaaaggcataccagttgaccactgggctgtggtggac
ttcactgcgtacgagcagtacaacaggctgaataccgggcaatttatttcaggatttatt
aggcggtgtggaaagttaggaatccaaatgcggaatcctcttttctgtgaaactgccaac
atgcatgccttcagagaattccctgtgctacgggagctgctcgacaaggtttacaaaaaa
gcaagatgccaattacaaattcttgtgtgtgtcatggctaggagggatgctggctatgga
tatcttaagtggttctctgagaccagattggggatggttactcaatgttgtttgtccggc
cccgccaacaaagtcagtgatcagtatcttgccaatcttgctctcaagttgaacgctaag
ctagggggcagcaatgtagagcttatagaaagacttccacggtttgaaggtgaaggacat
gtgatgtttattggtgctgatgtcaatcacccaggctctcagaacacaactagtccatca
atagcggctgttgttgccacagtgaattggcctgcagcaaaccgctatgcagctcgaatt
cgcccacaagcccatcgaatggagaagattcagaattttggggcgatgtgcctggagctt
gttgaggcttatgttcaggcaaataaagtcaagccagagaagattgtggtgttccgtgat
ggtgtaagtgagggccaatttgacatggttctgaatgaagaattacttgatctcaagaga
gcaatccaggggggaaattactgcccgaccattactcttattgtggcccggaagagacac
ctaacccggttgtttcctaaggtaaatgatcggagctttaatgggaatgtgcctccaggc
actgttgtggacacaacagtggtccacctatctgagttcgacttctatctttgcagccac
tatggtacacttgggacaagcaaacccacgcactatcatgtcctacacgatgagcacagg
tttagttctgaccagatccagaagcttatctataacttgtgtttcacctttgctcggtgt
acaaaacctgtctcgctggtcccaccagtgtactatgctgaccttgctgcctatagagga
aggctgtactatgatgcaattgtggcagaggttggagcttcagctgcaacttcatcatca
gtcgcctcaccatcatcatcatcggctggagcttggcccaatgacgggctttaccgtctg
catggtgctctggagaacatgatgtttttcatctga
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