Vitis riparia (riverbank grape): 117923794
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Entry
117923794 CDS
T07274
Name
(RefSeq) heat stress transcription factor A-4a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117923794
Transcription factors [BR:
vri03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
117923794
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Motif
Pfam:
HSF_DNA-bind
APG6_N
DUF7247
Nup88
SSNA1
Motif
Other DBs
NCBI-GeneID:
117923794
NCBI-ProteinID:
XP_034698134
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Position
10:16112937..16116061
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AA seq
448 aa
AA seq
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MDESPGSSNSPPPFLTKTYEMVDDPTTDSIVSWSQTNKSFIVWNPEDFSRDLLPRFFKHN
NFSSFIRQLNTYGFRKIDSEQWAFANEDFIRGQPHLLRNIHRRKPVHSHSIQNQKGQGTS
CPLSESDREGYRADIERLKHDKGALLLELQRHKEDRQGLELQMQHLKDRLQHMEQRQQTV
ISYLSQMLQKPGLALSFLPSMETHNRKRRLLTSNCFYDESDVEENRIATSHTVNTEKLDA
TYVLELVEFLESSLTSWEDILDEFRPTSGEEVIYGVGVPAQPFAVVLTEIDASSGDADIN
LQQQSPRLNLSSNCSRDVNSSVELDESMSCAESPGISYIQLNIDTRSKSTGIDMNCKPAA
TAPEVTTLKEQVVGAASPVPTGVNDVFWEQFFTENPGSSAEEVQLERKDDESRKNEGKPG
DHGRFWWNARSANKLADQMGQLTPAERT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctccaggcagttcaaattcaccacctccatttcttactaaaacatatgaa
atggtggatgatcctactacagattcaattgtctcttggagtcagactaataaaagcttc
atcgtgtggaatccagaagatttttcaagggatttgctgccgcggttcttcaagcacaat
aacttctccagctttatcaggcagctcaatacatatggctttagaaaaattgattctgag
cagtgggcatttgcaaatgaggattttatcagaggtcagccacaccttctgaggaacatc
catagacgcaagccagttcatagccattccatacagaatcaaaaaggacaaggaacttct
tgtccattatctgaatctgacagagagggttatcgggctgacattgaaaggctgaaacat
gataaaggggcacttcttttggagttacagaggcataaagaagacaggcaaggacttgag
ttgcaaatgcagcatctaaaggatcgcttacaacatatggaacaacgtcagcaaactgtg
atatcttacttgtctcaaatgttgcagaaaccagggcttgccttatctttcctaccgtca
atggaaacccataacagaaagagaaggttgctgacaagtaattgtttctatgatgaatct
gatgttgaagagaatcgcatagcaacttcccatacagtgaacacagaaaagcttgatgct
acttatgttttggagctggtggagtttttggagtcatccctaacttcttgggaggatatt
ctcgatgaatttcgtccgacttctggtgaagaggtaatatatggtgttggggtgcctgca
cagccttttgcagttgttcttactgaaattgatgcatcatctggggatgcagacataaat
ttgcaacagcaatcacctaggttaaatctgtcttctaattgttcaagggacgttaattca
tccgtggagttggatgaatctatgagttgtgcagaaagtccaggtatatcttatattcaa
cttaatattgatactaggtctaaatctactgggattgacatgaattgcaagcccgctgct
actgctcctgaggttactaccttaaaagaacaagtagttggagctgcatctcctgttcca
actggggtcaacgacgtattctgggaacagttcttcactgagaatcctggttcatcagca
gaggaagttcagttagaaagaaaggatgatgaaagcaggaagaatgaagggaagcctggt
gatcatggcaggttttggtggaatgcaaggagtgcaaataagcttgcagatcaaatggga
cagcttaccccagcagagagaacttga
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