Vitis riparia (riverbank grape): 117923817
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Entry
117923817 CDS
T07274
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00500
Starch and sucrose metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117923817
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vri01003
]
117923817
Enzymes [BR:
vri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
117923817
Glycosyltransferases [BR:
vri01003
]
Polysaccharide
Storage polysaccharide
117923817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Flg_hook
COG4_N
Motif
Other DBs
NCBI-GeneID:
117923817
NCBI-ProteinID:
XP_034698177
LinkDB
All DBs
Position
10:complement(14414952..14477067)
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AA seq
1011 aa
AA seq
DB search
MAAKLSTCFLSHGWGSLDCRRSNGRFLAPSQRLLPASCKMRQRNFSSQHKRQQTKKVSPD
RRPTNSHFQSNGDEDTEPENALADGVSSLNQGTIPDGEDADVDSHIAIEHINDNPLKHLT
VSEEMTPLGINVKSGEQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLEKILTEKDA
LQGEINILEMRLAETNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGSGADMHENW
NKAFDGVHSLGKELSLLRTENVSLKDDILALKEELSHVQKTDKRVVMLEKERSFLESALK
ELEFKLVASQEDVSKLSTLKFECKNLWDRVENLQVLLDRATDQADKAILVLEQNQELRKK
VDMLEESLEEANVYKLSSEKMQQYNDLMQKKIKLLEERLDRSDEEILSYVKLYQESIKEF
QDTLNNLKEESKRRALNEPVDDMPWDFWSRLLLIVDGWLLEKKISANDAKLLREMVWKRD
GRIRDAYLVCKDTNEHEAVAIFLKLTSSPKRSRLHVIHIAAEMAPVAKVGGLGDVVSGLS
RALQKKGHLVEIVLPKYDCMQYDHIRDLRVLDMELESYFDGRLFRNKVWVGTVEGLPVYF
IEPHHPSKFFWRGTVYGEHDDFRRFSYFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLY
WDLYAPKGLNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNRPDRMQDNSAHDRVNPV
KGAIVFSNIVTTVSPTYAQEVRTSEGGRGLHSTLNSHSKKFIGILNGIDTDAWDPATDVY
LKSQFNANDLQGKAENKEALRKHLGLSYADTRRPLVGCIARLVPQKGIHLIRHAIYRTLE
LGGQFVLLGSSPVPHIQVEFEGIANHFKGDDHIRLILKYDESLSHSIYAASDMFLIPSMF
EPCGLTQMIAMRYGSIPIARKTGGLNDSVFDVDDDTIPLQFRNGYTFLNPDEQGLNGALE
RAFNHYKTNKESWQKLVKKDMNIDFSWESSALQYEEIYEKSVARARAASLV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaagctatcgacgtgttttctgagccatggatggggcagtctcgactgcaga
cgctcgaatgggcgcttccttgcgccttctcaacggctactgccagcttcctgcaagatg
cggcagcgtaatttcagttcccaacacaagagacagcagacaaagaaagtttcccctgac
cggcgtccaacaaattcacacttccagtcaaatggagatgaagacactgaacctgagaat
gctttggcagatggtgtctcaagcttgaatcagggaaccatacctgatggtgaagatgct
gatgttgactcacatatagccattgagcatatcaatgataatcctttgaagcatctaact
gtttcagaggagatgacacctttgggtataaatgtgaaaagtggagaacagctttcaagt
tttcaactcgaggatttggtaggcatgctaaaaaatgcggagaaaaatatccttcttctc
aaccaagctagggttcgtgcacttcaagatcttgaaaaaattctcactgagaaggatgct
cttcaaggagaaattaatattttggagatgagattggcagagacaaatgcacggatcaaa
gttgctgcccaagagaagatacatgtggaaatcttggaggaacagttggttaacctgcgg
aatgaactgtctcataggggtgttactgagggaagtggagctgatatgcacgagaattgg
aataaagcttttgatggtgttcattctctcggcaaggagcttagtttgttgaggacagag
aatgtgtccctgaaggatgatatcttagcacttaaggaggaacttagtcatgtccaaaaa
acagacaaacgtgtggtaatgctagagaaagaacgttcatttttggagtctgctctgaag
gaattggagtttaaactcgtagcttctcaagaagatgtttcaaaactttctactctaaaa
tttgaatgcaagaacttatgggatagggtagaaaatttgcaagtgcttctagatagagca
accgaccaagcagataaagcaattttggtcctggagcaaaaccaggagctcaggaagaag
gtggatatgttggaagaatctcttgaagaagctaatgtttataagctatcatcagaaaaa
atgcaacaatataatgatttaatgcaaaaaaaaataaaactattggaagagcgtcttgac
aggtctgatgaagagatactttcttatgttaagttatatcaagaatctataaaggaattt
caagatactcttaataatttgaaagaagagagcaagagaagggcactaaatgaacctgtg
gatgatatgccttgggacttttggagtcgtttattacttattgttgatggttggctgctt
gagaagaaaatatcagccaatgatgcaaagctgttgagagaaatggtgtggaagagagat
ggacgtattcgtgatgcatacttggtgtgcaaggacacgaatgagcatgaagctgtggct
atatttctcaagttgacatcatcaccaaaacgttcaagattgcatgttattcatattgca
gcagagatggcaccagttgctaaggttggtggtttgggagatgttgtgtctggtcttagc
agagcactgcagaaaaaaggacaccttgtggaaattgttcttccaaaatacgactgcatg
caatatgaccatatccgtgacttaagagtcctagacatggagctagagtcatattttgat
ggtcgactattcagaaataaagtctgggttggcactgtcgaagggcttcctgtctatttc
attgagcctcatcatccaagtaagttcttctggagagggacagtttatggggagcatgat
gatttcagacgtttttcatattttagccgtgcagcacttgagttacttctccaagctggc
aaaaaaccggacataattcattgccatgattggcagacagcttttgttgcacctctttac
tgggatttatatgccccaaaaggattaaattcagctagaatatgctttacttgccacaat
tttgaataccaaggaactgcacctgcttccgaaatggcatcctgtggtcttgatgtccac
cacctaaacaggccagacaggatgcaggacaactcagcgcatgacagagttaatcctgtt
aagggtgcaattgtgttctctaacattgtgacaactgtatcgccgacctatgcacaggaa
gtgcggacttctgagggagggcgaggtcttcattcaacacttaattctcactcaaaaaaa
ttcatcggaattctaaatggaattgatactgatgcatgggaccctgcaactgatgtttat
cttaaaagccaattcaatgctaatgatcttcaagggaaagcagaaaataaagaagccctg
agaaagcatttagggctttcttatgcagacaccaggcggcctctggttggttgcatagca
cgattggtgccacagaagggtatacatcttattagacatgcaatatatcgcacattggag
ctgggaggacagtttgtacttcttggttctagcccagtaccacatattcaagtggaattt
gagggtattgcgaaccattttaaaggtgatgatcacattcggttgatattaaagtacgat
gagtctcttagccattctatttatgcagcatcagatatgttccttatcccgtctatgttt
gagccctgtgggcttacacagatgatagcaatgagatacggttctatacccattgcaaga
aaaactggtggtctaaatgacagtgttttcgatgttgatgatgatacaatacctctccag
tttcgaaatggttatacatttttgaatcctgatgagcagggattaaacggtgctttggaa
cgtgcatttaatcactataagacaaacaaagagagttggcagaagcttgttaagaaggac
atgaatatagatttcagttgggaatcctcagccttacagtatgaggaaatttatgagaaa
tctgtagccagagcaagggctgcaagtcttgtttga
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