Vitis riparia (riverbank grape): 117923833
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Entry
117923833 CDS
T07274
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117923833
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117923833
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Helicases
117923833
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117923833
NCBI-ProteinID:
XP_034698198
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All DBs
Position
10:12728581..12752095
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AA seq
516 aa
AA seq
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MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW
QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKE
VFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVAT
PGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTI
LPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQR
RYQLPEKLKSFRLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQ
IKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTY
IHRAGRTARAGQTGCCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSA
LEKLKDTVVSETTRKRKINFKSSGADKRKQEKHLKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcaaagcagaagaagaacgttcctgtactcccatggatgagaagccctatt
gatgtcagtctcttcgaagagtgtcctctccatctctttccatgtctcgatcccaggttg
gaggtggctttgaagaacatgggcttctcatcactctttccagtgcaggttgcagtttgg
caagagacagttggacctggtgcttttgagcgagacctttgtataaactcaccaaccgga
agtgggaaaactttagcttatgctttgccaatagtgaacgtgctgtcaagtcgtgctgtt
aagtgtctacgtgccttagtggtgttgcctactcgtgatttggccttgcaggttaaagaa
gtttttgctgctattgcacctgcagtgggcttatccgttggcctggcagttggtcaaact
tcaattgctgatgaaatttcagaacttattaaaagacccaagcttgaggcagggatctgt
tatgacccagaagatatttcactggaattacaaagttcagtagacatattggtggcaaca
cctggaaggctgatggaccatatcaataccactaagggttttacacttaagcatcttcgt
tatcttgttgttgatgaaacagatagattactcagggaggcatatcagtcctggctaccc
accgttctccagttgactcgctctagtgatgaaagcctgttcccttgtggcaagaccatt
cttccttctacatttggttccatgaacaccataaggagatgtggtgttgaaagggggttt
aagggtagatcttaccctaggcttgtgaaaatagtactatctgccacactaactcaagat
ccaagcaagcttgctctgcttgatctgcatcatcctttgcttttgacggcagggcaaagg
cgttatcagctcccagaaaaactaaaatcttttaggctgatttgtgaatctaaacttaaa
cccctgtatttggtcgcccttctaagggatttaggaggggagaaatgcattgttttcaca
tcatctgtagagtcagctcatcggctatgtaccttactgaatttttttggtgatttgcaa
atcaagattggggagtattcaggtcttcaacatcaacgtgtgagaagcaagactttggag
gagttccgtggagggaaaatacaagtactgatttcctctgatggaatgacccgtggaatg
gatgtcgaaggggtgagaaatgttattaattatgatgtgcctaaatttatcaagacgtat
atacatcgggctggtcggactgcaagagcaggccagactggttgttgcttcacactactg
cgtaaagatgaggataagcgtttcaagcagctgttgcagaaagctgacagcgactcatgt
cctgttcactctgttgcttcaaattcaattgaggcacttcactctgtttacgtttctgca
ttggagaaactgaaagatacagttgtatcagaaacaaccaggaagcgcaaaatcaatttc
aagtcttcaggagcagataaaagaaaacaagaaaagcacttgaaggaatag
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