Vitis riparia (riverbank grape): 117923936
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Entry
117923936 CDS
T07274
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117923936
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117923936
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117923936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
zf-RING_Vps41
zf-C3H2C3
zinc_ribbon_16
Prok-RING_4
VPS18_RING_C
PHD_NSD
PHD
Prok-RING_1
EHMT1-2_CRR
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117923936
NCBI-ProteinID:
XP_034698332
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All DBs
Position
10:complement(3315217..3325263)
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AA seq
314 aa
AA seq
DB search
MENNNITTTNSKLDSDEPKSVATATAAEEQNPNSPAAEDPNPNSNQAPPRQSSRTPFTNL
SQVDADLALARTLQEQERAYMMLRINGEGSDYGSWEAGSYFNEEEFDDPNDGTDVDDGVD
DEDEDEGEYDGTDEDAFDVHAQADDGEDDNPTIEFDPAVFSSDEAYARALQHIEEQEMAA
RLLALAGIHDRECLFRNGVEDTEDHGGNSQDTWEEVDPDELSYEELLALGEVIGTESRGL
SSDTIASLPSVTYKAQSNQEGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLQIN
KVCPICSTEVSSSR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaacatcaccaccaccaactctaaacttgactccgatgaacccaaatcc
gtcgccaccgccacggccgcggaggagcagaaccctaattccccggccgccgaagaccca
aaccctaattcgaaccaggcgccgcctcgccagtcttcgaggactccgttcaccaatctt
agccaggtcgatgccgacctcgccctcgcccgcaccttgcaggagcaggaaagagcatat
atgatgctaaggatcaatggtgaagggagtgattacggaagttgggaagctggaagctat
ttcaatgaggaagagtttgatgatcccaatgatggcactgatgtggatgatggggttgat
gatgaggatgaggatgaaggggagtatgatggcactgatgaagatgcttttgatgtgcat
gctcaagctgatgatggggaggacgacaacccaactattgaatttgatccagctgtgttt
tctagtgatgaggcctatgcaagagctctacagcacattgaagaacaagaaatggctgca
aggttgttggcccttgctgggatacatgatcgtgagtgcctgttcagaaatggagttgag
gatacagaggatcatggcggtaactctcaggatacatgggaggaggttgacccagatgaa
ctttcatatgaggaattgcttgcattgggtgaagtaatcggaactgagagccgagggctt
tcatctgatacaattgcctctttgccttcagttacctacaaggcacaaagcaatcaggaa
ggaagcaatgattcatgtgtcatttgccggttggactatgaggatggtgagaccttgact
gtgctttcttgcaaacattcataccattctgagtgcataaacaattggttgcaaataaac
aaggtttgccccatttgcagcactgaggtctcgtcttccaggtag
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