KEGG   Vitis riparia (riverbank grape): 117924130
Entry
117924130         CDS       T07274                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117924130
   03400 DNA repair and recombination proteins [BR:vri03400]
    117924130
Spliceosome [BR:vri03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    117924130
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     117924130
SSDB
Motif
Pfam: AAA_33 SPRY KTI12 AAA_17 AAA_18
Other DBs
NCBI-GeneID: 117924130
NCBI-ProteinID: XP_034698590
LinkDB
Position
10:18828102..18833797
AA seq 704 aa
MASIKRQLSEPEEPESKKSKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHD
HGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNL
GETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVA
KEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASAL
YDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKV
PGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPRNYIIDQTNVYKNARKRKLKPFANF
QKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPSSDEDFDQVL
FPELNRGEAQKCLEEMKRALGTASHLNLKSNFSPYSQESSLQSFNSSSLQNQGAPSVPDE
RSLSYHPPLPPQNYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMPRDAPYETSL
GYSRHFLSRNDSNSYGTYGYDNSRGSIPGVGMANYQSFGMVDPYRRTNLESRNPIPMGAT
DPYVSGMVESHDRYNVEGVNHYETQAESMRTSLFSHNTLGGHGSVPGGFGANQLVPRDPR
HLPTPSQMSYGSPYGAPPVRPSYGNFPTDMQHPGGYAPPRPRYY
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggcgtcgatcaaacgccagctttcagaaccagaagaacccgagtcgaagaagtcgaag
gcagccttatcggattctcccgaacacaagaccaagcaacgcgtggtgctcaatcccgca
gactgcgatttagatttcaatattgttggtgatggtcttcaaggttctgcacttcatgac
catggatttgcttattgctggtctggtgctcgtggtaatgttggaataactggagggaag
tattgttttggttgcaaaattatttcaactcagccagtggatatggaagacacccctcct
gaccagcagcatgtttgtcggcttggcatttcaagaggagatgatgcagtgggaaacctt
ggggaaacagagcacagctttgggtttggtggcacaggaaaattttcagttgctggaaaa
ttttcaaattatggtgaaaagtttggagttggggatacaattgtatgtgctgtaaatctt
gaaactaaacctttggcttccattagtttctccaaaaatgggaaatggttgggtgttgca
aaggaatttgatgcaggtgtaaagggtcttggggttgtggattctccaatgaggcagctg
cattgggaatcagctctctttcctcatgttttgttgaaaaatgtaatggttcaagtccag
ttcagtactgaagagggacttgttcctgaagaaggctataagccttgggcttctgcactt
tatgatggaaatgcaataatgggaccttctttttctagcccaagagattgtgaagtgatg
atgatggtaggattacctgcttctggaaagtccacttgggcagagaaatgggtgaaagag
catgctgagaagcgatatgttttacttggaacaaatctggctctggatcaaatgaaggta
ccagggctactgcgtaagcagaattatggtgaacgatttgagcgtctaatggaccgagca
actggaatatttaatactttactgtccagggcttccaagacacctcgcaactacattatt
gatcaaacaaatgtttacaagaatgcacgtaaacgtaaactgaaaccatttgcaaatttt
cagaagattgctgttgtgctctttccaaagccagaagagcttaagtttcgtgctgaaaaa
agatttaaagaaatgggaaaggaggtaccagctgatgcagtaaatgaaatgattgccaat
tatgtcttgcctggaagtaaggacatgcctagttcagatgaggattttgatcaggttctg
tttccagaactgaacagaggagaagcacaaaaatgtttggaagagatgaagcgtgcctta
ggaactgcatcccatttgaacttgaaaagcaacttttcaccttattctcaggaaagctct
ctccagtcatttaatagctcttcactgcaaaatcaaggggctccatcagtccctgatgaa
cgtagcctgagttatcatcctcctctccctcctcagaactattattaccaaaggcctgct
catatgaactcaggtcatcagggggttgcactacatggaagagtggaaccatttcccaga
gcgtaccaagacaatcaaaatccgtttatgccaagagacgctccgtatgaaacctcctta
ggttacagtagacattttctttctagaaatgattccaatagctatgggacttatgggtat
gataactccagaggttccattcctggggttggtatggccaattaccagagctttgggatg
gttgacccctacagaagaaccaaccttgaaagcaggaatcctattcccatgggtgctaca
gacccttatgtgagtggaatggttgaatcccatgatagatataatgttgaaggagtgaat
cattatgaaacccaagctgaaagtatgaggacgtctttattttcacacaacacccttggt
ggacatggtagtgtccctggaggctttggagctaatcagctagtaccaagagaccctaga
catctgcctactccttcccaaatgtcatatggttcaccttatggagctcctcctgtaagg
ccctcttatggaaatttccccactgatatgcagcatcctggagggtatgctcctcctcgt
ccaagatattactga

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