Vitis riparia (riverbank grape): 117924130
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Entry
117924130 CDS
T07274
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117924130
03400 DNA repair and recombination proteins [BR:
vri03400
]
117924130
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
117924130
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117924130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
117924130
NCBI-ProteinID:
XP_034698590
LinkDB
All DBs
Position
10:18828102..18833797
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AA seq
704 aa
AA seq
DB search
MASIKRQLSEPEEPESKKSKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHD
HGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNL
GETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVA
KEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASAL
YDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKV
PGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPRNYIIDQTNVYKNARKRKLKPFANF
QKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPSSDEDFDQVL
FPELNRGEAQKCLEEMKRALGTASHLNLKSNFSPYSQESSLQSFNSSSLQNQGAPSVPDE
RSLSYHPPLPPQNYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNPFMPRDAPYETSL
GYSRHFLSRNDSNSYGTYGYDNSRGSIPGVGMANYQSFGMVDPYRRTNLESRNPIPMGAT
DPYVSGMVESHDRYNVEGVNHYETQAESMRTSLFSHNTLGGHGSVPGGFGANQLVPRDPR
HLPTPSQMSYGSPYGAPPVRPSYGNFPTDMQHPGGYAPPRPRYY
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgatcaaacgccagctttcagaaccagaagaacccgagtcgaagaagtcgaag
gcagccttatcggattctcccgaacacaagaccaagcaacgcgtggtgctcaatcccgca
gactgcgatttagatttcaatattgttggtgatggtcttcaaggttctgcacttcatgac
catggatttgcttattgctggtctggtgctcgtggtaatgttggaataactggagggaag
tattgttttggttgcaaaattatttcaactcagccagtggatatggaagacacccctcct
gaccagcagcatgtttgtcggcttggcatttcaagaggagatgatgcagtgggaaacctt
ggggaaacagagcacagctttgggtttggtggcacaggaaaattttcagttgctggaaaa
ttttcaaattatggtgaaaagtttggagttggggatacaattgtatgtgctgtaaatctt
gaaactaaacctttggcttccattagtttctccaaaaatgggaaatggttgggtgttgca
aaggaatttgatgcaggtgtaaagggtcttggggttgtggattctccaatgaggcagctg
cattgggaatcagctctctttcctcatgttttgttgaaaaatgtaatggttcaagtccag
ttcagtactgaagagggacttgttcctgaagaaggctataagccttgggcttctgcactt
tatgatggaaatgcaataatgggaccttctttttctagcccaagagattgtgaagtgatg
atgatggtaggattacctgcttctggaaagtccacttgggcagagaaatgggtgaaagag
catgctgagaagcgatatgttttacttggaacaaatctggctctggatcaaatgaaggta
ccagggctactgcgtaagcagaattatggtgaacgatttgagcgtctaatggaccgagca
actggaatatttaatactttactgtccagggcttccaagacacctcgcaactacattatt
gatcaaacaaatgtttacaagaatgcacgtaaacgtaaactgaaaccatttgcaaatttt
cagaagattgctgttgtgctctttccaaagccagaagagcttaagtttcgtgctgaaaaa
agatttaaagaaatgggaaaggaggtaccagctgatgcagtaaatgaaatgattgccaat
tatgtcttgcctggaagtaaggacatgcctagttcagatgaggattttgatcaggttctg
tttccagaactgaacagaggagaagcacaaaaatgtttggaagagatgaagcgtgcctta
ggaactgcatcccatttgaacttgaaaagcaacttttcaccttattctcaggaaagctct
ctccagtcatttaatagctcttcactgcaaaatcaaggggctccatcagtccctgatgaa
cgtagcctgagttatcatcctcctctccctcctcagaactattattaccaaaggcctgct
catatgaactcaggtcatcagggggttgcactacatggaagagtggaaccatttcccaga
gcgtaccaagacaatcaaaatccgtttatgccaagagacgctccgtatgaaacctcctta
ggttacagtagacattttctttctagaaatgattccaatagctatgggacttatgggtat
gataactccagaggttccattcctggggttggtatggccaattaccagagctttgggatg
gttgacccctacagaagaaccaaccttgaaagcaggaatcctattcccatgggtgctaca
gacccttatgtgagtggaatggttgaatcccatgatagatataatgttgaaggagtgaat
cattatgaaacccaagctgaaagtatgaggacgtctttattttcacacaacacccttggt
ggacatggtagtgtccctggaggctttggagctaatcagctagtaccaagagaccctaga
catctgcctactccttcccaaatgtcatatggttcaccttatggagctcctcctgtaagg
ccctcttatggaaatttccccactgatatgcagcatcctggagggtatgctcctcctcgt
ccaagatattactga
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