Vitis riparia (riverbank grape): 117924327
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Entry
117924327 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117924327
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117924327
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117924327
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117924327
NCBI-ProteinID:
XP_034698827
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Position
10:22781649..22784598
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AA seq
447 aa
AA seq
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MAVSHVLRSSPFRFLCCINPRKTLHFQFKPMSWTCSKCTFINPSSQTSTCLICSSSSSIP
QSPSSSSAPSPSTPKWSCKACTFLNPYRNPICEVCGTRASVSSLSSFEDLNCTDPDGELD
SSVGSVFLPLQRCSKRKNRDPVEIDAAAGGSGGFGRVKSANKAVVALEDTDSDSVLSSLK
ILSYNVWFREDLEMDKRMQALGDLIQLHSPDLICFQEVTPNIYDVFRQSCWWKVYRCSVP
NEMAHLRPYFCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPC
PAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDEWVDAWADL
RPGENGWTYDTKSNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKK
VRKEIQQLVLPVLPSDHYGLLLTISSQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtcccacgtactacgatcatctcctttccgattcctctgctgcataaaccct
aggaaaacccttcattttcaattcaaaccaatgtcttggacctgctccaaatgcacattc
ataaacccttcttcacaaacttcaacctgcctcatctgctcttcttcttcttcgataccc
cagtctccttcatcttcgtctgccccatctccttcaaccccgaaatggtcttgcaaagcc
tgcacctttttgaacccgtatcgcaaccccatctgcgaagtctgcgggacaagagcctca
gtgtcgtctctgtccagcttcgaggatttgaactgtacggatcctgatggtgagttggac
tcctcagttgggtctgtgttcttgcccttgcagcgttgtagtaagaggaagaatcgggac
ccagttgagattgatgccgctgctggtggatcgggtgggttcggtagggttaagtcggcg
aataaggcggtggtcgcgttggaggatactgattcagattcggttttgagttcattaaag
atcttgagttataatgtttggtttcgagaagacctggagatggataaaaggatgcaagca
ctaggtgaccttattcaactacattccccagatctgatttgttttcaggaagttactcca
aatatctatgacgtatttcggcagtcctgctggtggaaggtatatcgatgctcagttcca
aatgagatggcacacctaagaccctacttttgcatgctgttaagcaaactcccagtgaaa
tccttcagctgtaaacgcttcagcaactctattatgggaagagaactttgcattgctgag
cttgaagttcaggcaggcaagcctttggttctcgccaccagccatctcgagagtccttgc
ccagcccctcccaaatgggatcagatgtacagcaaggaacgggtggatcaggcaaaggag
gcccttaaccttctgacgaaaaatccaaacgtgatttttggtggtgacatgaactgggat
gagaagtcagatggccaatttcctctacctgatgagtgggttgatgcctgggcagatcta
aggcccggagaaaatggatggacatatgatacaaagtccaatcagatgttgtctggcaat
cggaccctgcaaaagcgactagatcgattcatgtgcagattgcatgatttcaagataagt
aaaattgacatgataggaatggagccaataccaggtttatcatattgcaaggagaagaaa
gtgaggaaagagatccaacagttggtgctccctgttttgcccagtgatcattatggcttg
cttttaacaatatctagccagtga
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