Vitis riparia (riverbank grape): 117924386
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Entry
117924386 CDS
T07274
Name
(RefSeq) nuclear transcription factor Y subunit B-6 isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117924386
Transcription factors [BR:
vri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
117924386
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
CENP-T_C
TAF
Motif
Other DBs
NCBI-GeneID:
117924386
NCBI-ProteinID:
XP_034698902
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All DBs
Position
10:complement(20715689..20718602)
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AA seq
221 aa
AA seq
DB search
MQQKSEERGMTFCFSFKAIDLCMLSSSGMKLTEPNEKQPESNQMSNNSAMEDTECTVREQ
DRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITA
EDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRTTIRSEPVVKRNVEFGGLSVAAFAPAF
HMGHHQGFFGAAAMSGYLKEAPNAGTSQAAVASLEPYGQYK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaaatcagaagaaagagggatgactttttgtttcagttttaaagctattgat
ctttgcatgttgtcaagctcaggaatgaagctgacagaacccaatgagaagcagcctgag
agcaatcagatgtccaacaattcagccatggaagacactgaatgcactgtgagggaacaa
gacaggttcatgccaatagcgaatgtgatcaggatcatgcgcaaaatcctacccccacat
gccaaaatctcggatgatgccaaggaaacaatccaggagtgtgtgtctgagtacatcagc
ttcatcacaggtgaagccaatgagcggtgccagcgcgagcagcgcaagaccatcactgca
gaggacgtgctgtgggcaatgagcaaacttggttttgatgactacatggagccactcacc
atgtacctccaccgctaccgcgagcttgaaggcgaccgtaccaccatcaggagtgagcca
gtggtgaagaggaatgtggagtttgggggtctgagcgtggcggcatttgcgccggcgttt
catatgggtcatcaccaggggttctttggagcagcagccatgagtggatacttgaaggaa
gctcccaatgcaggcacatcccaggctgcagtggctagcttggaaccatatggccagtac
aaatga
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