Vitis riparia (riverbank grape): 117924558
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Entry
117924558 CDS
T07274
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117924558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117924558
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
117924558
Prokaryotic type
Archaeal type
TFE
117924558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
wHTH-PRTase_assc
CpXC
HVO_2753_ZBP
Cas12f1-like_TNB
Zn_ribbon_IS1595
ADK_lid
Zn_Ribbon_TF
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117924558
NCBI-ProteinID:
XP_034699101
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All DBs
Position
11:599..29270
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AA seq
475 aa
AA seq
DB search
MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQTKEGDEKIKLH
THSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISM
EDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLS
RVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEV
AFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEVKQESKMGSSSAPLGSSD
DKKSTTNKDEEKNLQDEYVKAYYAAILKRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQ
VGMKSKRDEDEGDDDFEWEEAPTVGNRSESFKVNDLNVQADASGDDEDDIDWEEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgaaccattcaataggttggtgaagcttgcagctagagcattttatgacgat
ataacaaccaaaggagacaaccagcccaagactgggaggagtgataaccggggcattgct
gtagtggtgcttgatgctctcacaagacgacaatgggttagagaagaagatttggcaaag
gacttaaagcttcactcaaagcagcttcgtcggactctacgattttttgaagaagaaaaa
ttagttacccgggatcataggagagagactgctaagggtgcaaaaatatatagtgctgca
atagctgccacaggtgatggacaacagactaaggagggagatgaaaagataaagctgcat
actcactcttactgttgcttagattatgcgcagatttatgatgttgtaagatatagattg
catcgtatgaagaaaaaactaaaagatgaactggaggacaagaacacagttcaggagtat
atatgccccaattgtggcaaaagatacaatgctttagatgcactacgattgatatctatg
gaagacgaatattttcattgtgaaagttgcaatggagaacttgtagcggagagtgacaag
ttagcttctcaagagataggtgatggggatgacaatgccaggaggcggcgacgtgaaaag
ttgaaagacatgcttcaaaaaatggaggtacagcttaagccattaatggaccaactcagc
agagtaaaagatttgcctgttcctgaatttggaagtcttcaagcgtgggaagcacgagcc
aatgctgctggacgtgcagctaatggtgattctaatgctaatgattcctccaaatcttct
caagggctaggatttggtggaacaccaatgccttttgttggagagacaaaggtcgaagtt
gctttttctggtgtcggagttaaggaagaggatagtaaatctgaaattgcaaacgccagt
ttgaaagtcttgccaccctggatgatcaaggaagggatgaaccttacaaaagagcaacga
ggagaggtcaagcaggagtctaaaatgggaagcagttcagcacctctaggatcttcagat
gacaaaaaatcaaccactaacaaagatgaagagaaaaatttacaggatgagtatgttaaa
gcttattatgctgctatacttaagaggcaacaagaacaagaagaagctgccaagaagcaa
ctggagctgtcaaatgcacatatctccaatagtgttttgggtacatcttctaatcgtcaa
gttggcatgaagtccaaacgggatgaagatgagggagatgatgattttgaatgggaagag
gctccaactgttggcaatagaagtgaaagtttcaaggttaatgacttgaatgttcaagct
gatgcttcaggagatgatgaggatgatatagactgggaagagggttga
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