Vitis riparia (riverbank grape): 117924635
Help
Entry
117924635 CDS
T07274
Name
(RefSeq) RING-H2 finger protein ATL43-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117924635
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117924635
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117924635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING-like
Prok-RING_1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117924635
NCBI-ProteinID:
XP_034699211
LinkDB
All DBs
Position
11:1859745..1861712
Genome browser
AA seq
436 aa
AA seq
DB search
MSLLGFSCLVFWLFFCVDGGVGADDVVVVAANPSQSPPLPPQALPRPNFSPFRPSIAVIV
GVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSSAARKNSGIDRTVIESLPVFRFASL
RGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDIL
LVEEPKTSVAPLPEPDPPEAEKPDAEPRNPEVRRVSGRHSSAGERRSGLVQIVLHKPDET
TSSRRSLDSSSSSSRKRNEPVAVGCFDRPRKDELLLTSEDRNSFERRLDHRIIVSAAGSG
GFHQRWSDVQPSDLLYLRSEMIISDNRRLSSVSGSRPSLSSKGRQHRQSHQLQLHSNRKD
GEQCHGTIEGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWIS
QSRPSIRSERAGTVAL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttctcggtttctcgtgtctagtcttttggctcttcttctgtgtagatggtgga
gttggagccgatgatgtggtggtggtggccgctaatccttcgcagtctccgccactgccg
ccgcaggccttgcccaggcctaatttttctccgtttaggccgagtatagcggtgatagtg
ggggttctcactactatgttctccattacttttcttcttcttctctacgccaaacactgc
aagagaggaaacggcgttgtttacaccggaacgcctccgctttcctccgctgccaggaaa
aactccggcattgacagaacggtgatcgagtcgctgccggttttccgattcgcgtcgctc
cgcggccagaaggacgggctcgagtgcgctgtttgcttgaaccggttcgagcccaccgaa
atcctgcggctgttgccgaaatgcaagcacgctttccacgtcgaatgcgtggacacctgg
ctcgacgcccactccacctgccctctctgccgctaccgagtcgacccggaggatatcctc
ctcgtggaagagccgaagacctcggtggcaccactgccggagccagaccctcccgaggcc
gaaaaaccggacgccgaaccacgaaacccagaagtccggcgagtttcggggaggcattcg
tcggcgggggagaggcgcagtgggttagtccaaatcgtcttacacaaacctgacgaaacg
acgtcatcgaggaggtccctcgacagctccagctccagctcaagaaagagaaacgagccc
gtagccgtgggatgctttgacagaccgagaaaagacgaattgctgcttaccagcgaagac
agaaacagcttcgagcggcggctggaccaccggatcatagtctccgccgctggatcggga
gggttccaccagcggtggagcgacgtacagccgtcggatctactgtatctacggtcagaa
atgataataagcgacaaccgtcgattgtcatccgtatcgggatctaggccgtcgctttca
tcaaagggccgacagcatcgtcagagccatcagctgcagctacactcaaacaggaaggat
ggagagcagtgtcatggaaccattgaaggcggcagctggagtggcagaagtgtaattaat
tcaagaagcgtgtcggaaatcacgggcctcagcagactaggtagtaactaccatcacctc
gaccgtcaccatcaacagcgacaggcaggtgtcgtgtcgagatggttggcctggatctcg
caatcgcggccatctatacggtcagaacgagccggcactgtagcattgtag
DBGET
integrated database retrieval system
