Vitis riparia (riverbank grape): 117924699
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Entry
117924699 CDS
T07274
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117924699
03029 Mitochondrial biogenesis [BR:
vri03029
]
117924699
Membrane trafficking [BR:
vri04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117924699
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117924699
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Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
117924699
NCBI-ProteinID:
XP_034699298
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Position
11:2546135..2590579
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AA seq
875 aa
AA seq
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MWFSFWRSRDRFSLDELRHLTYQLMKIQIVNEVNKDFVVEALRSIAELITYGDQHDPAFF
EFFMEKQVMGEFVRILKISRSVTVSLQLLQTMSIMIQNLKSEHAIYYMFSNEHINYLITY
TFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTQNDEVVSFPLYVEAIRYAFQEENMV
RTAIRALTLNVYHVGDESVNRYVTTTPHAAYFSNLVTFFRKQCINLNGLVSDASKNPGPE
STSSILVAVDEIEDNLYYFSDVISAGIPDIGRLITDNILQHLIFPLLLPSLRMEAVNETQ
ISAVTSLYLLCCILRIVKIKDLANTVAASLFCPLEAFIKISETKLNGYISGHGFTHEREQ
SDSDNLDTKVESGSLRVTTSNLPGSSQSHQEDVAFQLSCSGSSLALREVLLSYVNNGDDM
LVLGSLSVIATLLQTKELDESMLDALGILPQRKQHKKLLLQSLVGEGSDEEQLFSPESSL
IRDGFNSELDSYLQKLKQEQYGVLCSCPEVAASPRVHRFQVLDALVNLFCRSNISAETLW
DGGWALRQLFPYNETEFNSHHLELLKDSYRNCIGTLLREVKGFWLDLLITVLCDEWRKCK
RAIEASSPRREPKYVLLPLQKSSFEEVIPVESSIVAGERMCELVKVFVLLHQLQIFSLGR
ALPDQPPILPPIDVPQSFRAKAAGLGVLGPKPGTELRLVDAVPCRISFERVDAVPCRISF
ERGKERHFRFLAVSMETSGWVLLAEELPLKQHYGVVRVTAPLAGSNPKIDDKHARWLHLR
IRPSTLPFLDSDKRTTYAKVNKKALVDGRWTLAFSDEYSCKSALSMILEEINLQSNEVER
RIRPLLDLEREVNFSSPSPCPLEASSSSTTPSNSL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtggttttcgttctggagatcgagagatcggttctccttggacgaactcagacacttg
acttatcagctgatgaaaattcaaattgttaatgaggtcaacaaggattttgttgttgag
gcgctgaggtcaattgcggagttgataacatatggtgaccagcatgacccagcctttttt
gagtttttcatggagaagcaggtcatgggggagtttgtacgtatattaaaaataagtaga
agtgtgactgtttcacttcagttgctgcagacgatgagtattatgatccagaacttaaaa
agtgaacatgctatatactacatgttcagcaatgagcatattaactaccttataacttat
acctttgacttccgcaatgaagagctgttatcttactacatatccttcttaagagcaata
agtggaaagctgaacaagaatacaatttctttgcttgtgaagactcaaaatgatgaagta
gtttctttcccactgtatgttgaggcaatacggtatgccttccaagaagagaacatggtc
cgcactgcaatacgtgctttgacactaaatgtttatcatgttggagatgaatctgtaaat
agatatgttactaccacacctcatgcggcttatttttcgaacctggttacatttttccgg
aagcagtgcatcaatttaaatggattggtctctgatgcttcaaagaatccaggtccagaa
tcgacctctagtatacttgttgctgtagatgaaattgaggacaatctttactattttagt
gatgttatttctgctgggattcctgatattgggaggttaataacagacaacattttgcag
catttgatatttccattgcttcttccttctctaaggatggaagctgtaaatgagacgcag
atcagtgctgtcacttctctgtatttactttgttgcatcttgcgcatagttaaaatcaaa
gatctggcaaatactgttgctgcttctcttttttgtccattagaggcttttataaaaatt
tctgagactaaactcaatggctatatatctggtcatggttttactcacgaaagagaacag
tcagacagtgataatcttgatacaaaggtggagtctggaagtttaagagttaccacatca
aacttgcctggttcttcacaaagtcatcaagaagatgttgcctttcagcttagttgtagt
ggttcaagtttggctttaagggaggtcttgctttcttatgtcaataatggggatgatatg
ctagttttgggttctttgagtgtgatagcaactttattgcaaacaaaagaactggatgaa
tcgatgctagatgcacttggaattcttccacagcgcaaacaacataagaaactgctgctg
caatctttggttggtgagggctcagatgaagagcaacttttttctccagaaagtagcttg
ataagagatggtttcaatagtgagcttgatagctatctacaaaagctcaagcaggagcag
tatggagtgttgtgttcttgtcctgaagtggcagcaagtcctcgtgtacataggtttcag
gtgctcgacgctttggtcaaccttttttgccgctcaaatatttctgcggagaccttgtgg
gatggtggttgggctctgcgccaattatttccttataatgagactgagtttaacagtcat
caccttgaattgctcaaagactcatacaggaactgcatcggcactctcttgcgggaggtt
aaaggtttctggctagatctacttatcacagttctttgtgatgagtggaggaagtgcaaa
agagcaattgaggcttcatcccctcggagagagcctaaatatgtgctcttgccattacaa
aagtcctcttttgaagaggttattccagttgaatcatcaattgttgctggtgaaagaatg
tgtgagttggtgaaggtttttgtgcttcttcatcaacttcaaattttctcccttggtaga
gctttgcctgatcaaccgcctatccttcctccaattgatgttccccaatccttccgagca
aaagctgctggcctgggtgtcttaggtccaaaaccgggaaccgagttaagacttgttgat
gcagtgccctgcagaatttcatttgagagggttgatgcagtgccctgcagaatttcattt
gagaggggtaaagagcggcattttcgctttctagcagtttccatggaaacatctggatgg
gttctccttgcagaagaattacccctaaaacagcattatggagttgttcgtgttactgcc
cctttggctggctcaaatcctaaaattgatgataagcatgctagatggttacacctgcgg
atccgtccatccactctgccctttttggattcggataaacgcactacctatgccaaagtg
aacaaaaaagctttggttgatggcagatggaccctggcattcagtgatgaatactcttgc
aagtctgcattgtctatgattctcgaggagattaatctacaaagtaatgaagtggagaga
agaataagaccattacttgaccttgaaagagaagtaaatttttcaagcccttctccatgc
cctcttgaggcttcctcttcaagtacaacaccttccaattctttgtaa
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