Vitis riparia (riverbank grape): 117924926
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Entry
117924926 CDS
T07274
Name
(RefSeq) two-component response regulator ORR23-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117924926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117924926
Transcription factors [BR:
vri03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117924926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DUF2201
Motif
Other DBs
NCBI-GeneID:
117924926
NCBI-ProteinID:
XP_034699556
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Position
11:881702..884051
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AA seq
514 aa
AA seq
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MSDDYETPSPDGTQFPDGLRVLAVDDNVVCLKILVTLLEQCRYKVTATTKACEALEMLRE
NRENFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLK
PVRVLEIKNIWQHVVRKNLFDSGKPGVKEEKAMEMEKSKEKEEGGEEEEEDHPKEHSFED
GSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRENVASHLQKYRK
MLRKNCAKVSQQMDNSNLDRSRRGRRPSHAAIFSESQGYGSRNPDSRWEVNGDTKAEKPY
TPSSSLMYAKPLLQPVENQNMLFQQCLQSPQLAVSSRMHLPGLGGLLSAPAWPGRPPCPL
PEFSGPKVKTCFPGQQLPDGSMGVSPQFPNYSTSSEPCPFPFPEPSFAFADFSPSYQTLP
DASTGMETVNPNFSLVQHEGGLVNFNRGQTTAGCPLNIQGLNMESLKVNSQIFMQHCQEN
PDRESSIHLNSCRSTDDDLSAMVKQFHYNGPPNL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgattatgaaaccccgagtcctgatggaacccagtttccggatggcttgagg
gtcctggcggttgatgacaatgtagtttgtctgaaaatcctcgtaactttgcttgagcaa
tgtcggtacaaagttactgctacaacgaaggcttgtgaagctctggagatgttgagggag
aaccgagaaaatttcgatattgtgatcaccgacgtgaagatgccggacatggacggattc
acgcttctgaagatcataggactcgaaatggacataccagtaatcatgacgtctgtgaac
gacgacagaagcacggtcttgaaggggataaggcatggcgcccgggactatctgctgaag
cctgtgagggtgttggagatcaagaacatatggcagcatgttgtaaggaaaaatttgttt
gattccggtaagcctggcgtcaaggaggaaaaagctatggagatggagaaaagcaaggag
aaagaagaaggaggagaagaagaagaagaagatcatcccaaggaacattcttttgaagat
ggatccgtccggaagaaacagcggcttaattggacgtctgagctccatatcaaatttctc
aacgccattcaccagctggaaacagcagataaggcggttccaaagaaaatacttgaaatc
atgaacgagccagggcttagtagggagaatgttgctagccatctacagaagtacagaaaa
atgctgaggaagaattgtgctaaagtgagccaacaaatggataatagtaaccttgatcgg
agtagaaggggccggcgcccatcacatgctgccatcttttctgaaagccaaggctatggt
tcaagaaacccggatagcagatgggaagtaaatggtgatactaaagctgagaagccttat
acacctagctcttcccttatgtatgcaaagcccctcctgcaacctgtggagaatcagaat
atgttgttccagcagtgcctgcaatctcctcaattggctgtgtcttcaaggatgcatttg
cctgggcttggagggctcctctcagctccagcgtggccgggaagaccaccttgtcctctg
ccagagttcagtgggccaaaggttaagacctgttttccaggacaacagctgcctgatggc
tccatgggtgtttctccgcaatttcctaattatagcaccagctctgagccttgccctttt
ccatttcctgagccctctttcgcattcgctgatttctctccatcttatcaaacactacca
gatgcttcaactggaatggagactgtcaatccaaatttctctctagttcaacatgaggga
ggcctggttaacttcaatcgggggcaaacaacagcagggtgtccactcaacatacaaggt
ctaaacatggagagcttaaaggtaaatagccagatatttatgcaacattgtcaggagaat
ccagacagagagagtagcatccatctcaacagttgtaggtccacggatgatgaccttagc
gcaatggtgaaacagtttcactacaacggcccgcctaatttgtga
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