Vitis riparia (riverbank grape): 117925020
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Entry
117925020 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RNF144A-B
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117925020
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117925020
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117925020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-RING_5
zf-C3HC4_2
IBR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
117925020
NCBI-ProteinID:
XP_034699707
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All DBs
Position
11:19452429..19454989
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AA seq
329 aa
AA seq
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MEAMKLERPVVEIVDMEEEDAEEQVSLFLTPISCRGGTRNTAISVEQYSADKELYLSIKA
SLLQPQTPLIHLDNDDDDDDLQILGINPPTTPHAFSTRKPFTFPSVTETGQPSNSKPDPP
PTFVCEICIDPKPLNHSFSIKGCXHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEP
QQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRL
FCAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMY
IRCRCGFAFCYNCGAPSSTISHICPHCRH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatgaagctggagagacctgtagttgagatagtggatatggaggaagaagat
gctgaagaacaagtgtcgttgtttttgacacccatatcttgcaggggaggcaccaggaac
actgcaatctccgtcgagcaatactctgctgacaaagaactctatctctccatcaaagct
tctctccttcaaccccaaacccctctcatccacctcgacaacgacgatgatgatgatgat
ctgcaaattctgggcataaacccccccacaaccccacatgcattctccacgagaaaaccc
tttacttttccttctgttactgaaacagggcagccctccaattccaaaccagaccctcct
ccaaccttcgtttgtgaaatctgcattgaccccaaacccctaaaccactccttcagcatc
aagggctgcncccactcttactgctccgactgcatgaccaaatacgtggcctctaaactt
caagacaacgtttcccggatttcttgccccgcacccaactgcaccggagtgctagagccc
cagcagtgtcgtcccatcctcccatcccatgtgtttgatcgctggggaaatgctttatgc
gaggctctcattcttgggtctcaaaaattctactgtccttacaaggattgttctgctctg
ttaatcagagatgaaggagaggtcattaaagagtctgagtgccccaattgtaggaggctc
ttctgcgcccagtgtgaggttccttggcattctgggattgattgtggggagtttcagaaa
ttgaacaaggatgaaagagggagagaggacattttgatgatgaatcttgccaagaccaat
aactggaagaggtgccccaagtgcaagttctacgttgagaaatcatttggttgcatgtat
atcaggtgcaggtgtggatttgctttctgttacaactgtggagctccctcatctaccatc
tcccatatatgtccccattgtcggcattaa
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