Vitis riparia (riverbank grape): 117925088
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Entry
117925088 CDS
T07274
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03440
Homologous recombination
vri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117925088
03460 Fanconi anemia pathway
117925088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117925088
03400 DNA repair and recombination proteins [BR:
vri03400
]
117925088
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117925088
DNA replication proteins [BR:
vri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117925088
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
117925088
Bloom's syndrome complex (BTR)
117925088
FA (Fanconi anemia) pathway
117925088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
117925088
NCBI-ProteinID:
XP_034699819
LinkDB
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Position
11:complement(19057662..19066229)
Genome browser
AA seq
729 aa
AA seq
DB search
MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIESILSGRDCFCLMPT
GGGKSMCYQIPALAKPGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTQTTKVRDKIHE
DLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWGHDFRPSYR
KLSSLRNHLPDVPILALTATAVPKVQKDVIESLCLQNPLVLKSSFNRPNIYYEVRYKDLL
DDVYADLSKLLKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLD
DWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYY
GIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGE
QVAASICRKSCDACKHPNLVAKYLEEFASACALRQNNGFSRIFISSSSDLVDKEQLTEFW
NRDDEVSGSEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEENYYQNKFPDKQ
INKPDKNAISEALRETSKQRLLNALKQTQQRLGNLEINLETSAIFLENECYKKYGKTGKS
FYYSQVASTVRWLSTANSTDLTNRLGTKTSSATDNIISKADSPIISSLDQGPTKISNGEH
CSAKPQTSSCASPMQGASSQDKGLPPIPSLSDFVKSRTAKGHQANPLSKLRKQSPKRAER
NLEKRSRLQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcaccattgccggtgcaaagtgtatctggtactgagaagaaagtatgtgga
aaggaagctctggtcaagctcttaagatggcattttgggcatgcggaattcaggggaagg
caattggaggccattgaatccatcttatcgggaagagattgtttttgtctcatgccaaca
ggaggaggaaagtcaatgtgttatcagattcctgcactggcaaaaccagggattgtgctc
gtggtttgtcctttaatagccttgatggaaaaccaagtgatggcattgaaggaaaaaggg
attgctgcagaatttctttcctcaactcagaccacaaaagttagagataagatccatgaa
gaccttcaatctggaaaaccatccttaaggctactgtatgtaacaccagaattgattgca
acaccagggtttatgtcaaggttgacaaagattcatgctagagggttgctgaatctgatt
gccatagatgaggctcattgcatttcttcatggggacatgacttcaggcctagctaccgg
aaactttcatctttgaggaaccacctcccagatgtaccaatattggcattaacagccaca
gctgttcctaaggttcagaaggatgtgatagagtccttgtgcttgcaaaatcctttagtc
ctaaaatcatcattcaatcgtcctaatatatactatgaagttcgatacaaagatctgttg
gatgatgtctatgctgatctatctaagctactcaaatcttgtgggaatgtttgtggaatt
gtttactgccttgagcgtactacttgtgatgaattgtctgctcatctatcaaaaaatggc
atctcttctgctgcttatcatgcagggctaaacaataaattacggagttccgtcttagat
gattggatttcttctaagatacaagttgttgtggccactgtggccttcgggatgggcata
gacagaaaggatgtcagaatcgtttgccacttcaatattccaaagtcaatggaagcattc
tatcaagagtcaggtagagctggtcgagatcaattgccctcacggagtctcttgtactat
gggatagatgaccgcaaaagaatggaatttattctgagcaatgcagagagcaagaagttg
cagtcctcgagttcgcaggatgggatgtcaaaaaagtctcttgccgatttcagtcatatg
gttgaatactgtgaaggatctagttgccgaagaaaaaaaatccttgagaattttggggaa
caggtagctgcatcaatatgtagaaaatcatgtgatgcctgtaaacatccaaatctagtt
gcaaagtatttggaggagtttgcatctgcctgtgctcttcgccagaacaatggattctct
cgaatttttatcagcagctcctctgatctggttgataaagagcaactcaccgaattctgg
aatcgtgatgatgaagtaagcggttccgaggaagatatatccgattctgatgatggtatt
gaggttgggaagagtatggccaggcctaagttaccatcaaagtcaggactaagtgagaag
attgagttattgcaacgtgcagaagagaattattaccagaataaattccctgacaagcag
atcaataaaccagacaagaatgccatatcagaggccctcagagaaacaagcaagcaaaga
ttattaaatgccctaaagcaaacccagcagcgacttggcaacttagagattaacttagaa
acatcagccatcttccttgaaaatgaatgctacaagaaatacgggaagactgggaaatcc
ttctattattcacaagtggcaagcacagtgaggtggctatcaactgcaaattcaacagac
ttaacaaaccggcttggcaccaaaaccagttcggccacagacaacattatctctaaagca
gattctcctataatttcctccttagaccaaggaccaacaaaaattagcaatggagagcac
tgcagtgctaaaccacaaacttcttcgtgtgcttctccaatgcagggtgcttcttcccaa
gataaaggtctaccacctattccatccttatctgactttgtgaagagcagaacagcaaaa
ggccatcaagcaaaccctttatctaagttgagaaaacagtctccaaaaagagctgagagg
aatctggagaagaggtcaaggttgcagtaa
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