Vitis riparia (riverbank grape): 117925242
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Entry
117925242 CDS
T07274
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
vri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117925242
03083 Polycomb repressive complex
117925242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117925242
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117925242
Histone modification proteins
HAT complexes
HATB complex
117925242
HDAC complexes
Sin3A-HDAC complex
117925242
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117925242
PRC2.2
117925242
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117925242
Heterochromatin formation proteins
Other heterochromatin formation proteins
117925242
Chromatin remodeling factors
NuRD complex
117925242
NuRF complex
117925242
NuRF complex (fruit fly)
117925242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_IFT122_1st
EIF3I
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_HPS5
eIF2A
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
117925242
NCBI-ProteinID:
XP_034700088
LinkDB
All DBs
Position
11:complement(18022932..18031437)
Genome browser
AA seq
508 aa
AA seq
DB search
MESQTVKKKRGRKPKVRDYYEDAAGGKRGGGAGEGDGGGMRERAKSGQQQPVDDSYSRWK
NVVPVIYDWLANHNLVWPSLSCRWGPQFEHGNHKNRQRLYLSEQTDGTVPNTLVIANCEI
VKPRVAAAEYISAFNEEARSPFVKKHKTILHPGEVNRIRELPQSNRIVATHTDCPEVFIW
DIEAQPNRHAVLGAAVSRPDLILTGHQDNAEFALAMCPAEPFVLSGGKDKSVVLWSIQDH
ISTLATDSETTKPPGSGGSIIKSNANPSEGNDKPADSPSIGPRGIFHGHEDTVEDVQFCP
SSAQEFCSVGDDSCLILWDARVGFSPVVKVEKAHNADLHCVDWNPHDQNLILTGSADNSV
CMFDRRNLTSGGVGSPIHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDHQLVGKK
KEGGPRTPTSASGLFFKHAGHRDKVVDFHWNASDPWTVVSVSDDCDVSGGGGTLQIWRMS
DMIYRDEDAVLAELRNFKSHVAECPSWQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcagacggtgaaaaagaagagaggaaggaagcctaaggtcagggactactac
gaagacgccgcaggagggaagcgcggcggcggagccggagagggagacggaggcggaatg
agggagagggcgaagtccggccagcagcagcctgtcgacgacagctacagccggtggaag
aacgttgttccggtcatctacgactggctcgctaatcacaacctcgtttggccttcgctg
tcttgccggtggggtcctcagttcgaacatggtaatcataagaatcgacagcgcctctat
ctctctgaacagactgatggtactgttcccaatactctggtgattgcaaactgtgaaatt
gtcaaaccaagggtagcagctgcagaatacatatcagcgttcaatgaagaagcacgttca
ccctttgttaagaagcataagaccatccttcatcctggagaggttaacagaatccgggaa
ctcccacaaagcaatcggatagtagccacccataccgactgtcctgaggttttcatttgg
gacattgaagctcaaccaaatcgccatgctgtccttggtgctgcagtttctcgcccagat
ttgatattgactggacatcaagataatgcagaatttgcactagcgatgtgtcctgctgaa
ccctttgtgctttctggagggaaggacaagtccgtagttttgtggagtattcaagaccat
atatcaacattggccactgactcagaaaccactaaacctcctggatctggtggatcaatc
atcaaatctaacgctaaccccagtgaaggtaacgataagcctgctgatagtccatctatt
ggacctcgagggatattccatgggcatgaggatacagttgaagatgtgcagttctgtcct
tccagtgcacaggagttttgtagcgtaggtgatgactcttgcctcatattatgggacgca
cgagttggtttcagcccagttgttaaggttgaaaaagcacataatgctgatcttcattgt
gttgattggaatcctcatgaccagaatcttatcctaactgggtcagcagataattctgtt
tgcatgtttgatcgccgaaatctcacctccggcggggttggctcaccaatccataaattt
gaggatcacaaagctgctgtcctttgtgtgcagtggtgcccagataaatcatctgtattt
gggagttctgctgaggatggtttattgaacatttgggatcatcaattggtgggaaaaaag
aaagagggtgggccaagaacaccaacttctgcttcaggcttgtttttcaaacatgctggt
cacagggataaagttgttgactttcattggaatgcatccgatccctggactgttgttagt
gtatctgatgactgtgatgttagcggtgggggtggaacgttgcagatatggcgcatgagc
gatatgatatacagggacgaagatgcggtgttggctgagctcaggaacttcaaatctcat
gtagctgaatgcccttcatggcagtag
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integrated database retrieval system
