Vitis riparia (riverbank grape): 117925251
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Entry
117925251 CDS
T07274
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117925251
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117925251
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
117925251
NCBI-ProteinID:
XP_034700097
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Position
11:complement(3002509..3008973)
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AA seq
466 aa
AA seq
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MATTGTTEPAPVNGAAQSPGSDPKTELSETPLSASNAAAAESEQAPSENLESESTAAPET
EAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGT
SDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVAS
TQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAV
VGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLPAKRES
LYLDRETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIG
GANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEPVPSSY
GKMDSGLRSSYSQLGNTSYSSSSLSSQPYGGGYGSSGVGGYSSYRL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactggcacaacggaaccagctccggtgaacggcgctgcgcagtctccggga
tctgatccaaagaccgaactatcggagacacctctctctgccagtaacgccgccgctgca
gagtcggagcaggcaccatctgaaaatcttgagtcagagtccacggcggcgccagagacg
gaagctccggcgccggcctcggagaagaaatggccgggctggcctggagactgcgtattc
cggcttatcgtccctgtgctcaaggtcggcagcattattggccgcaaaggcgagctgatc
aagaagatgtgtgaggagactagggctcgcattcgcgtcctcgacggcgccgttggaaca
tctgatcgtattgttttgatatctggaagggaagagccagaggcaccattatcacctgca
atggatgctgtaatcagagtattcaaacgtgttactgggttatctgaaagtgaaggtgat
ggtaaagcatatggagctgctggtgttgcattctgttcaatccggttattggtagcatct
acacaagccattaatttaattggaaaacaaggctctttgatcaagtcaatacaggagagc
actggtgcatctgtgcgagtactgtcaggagatgaagtcccgttctatgctgctgcggat
gagagaattgtagagttgcagggagaagccttgaaagttcaaaaagctcttgaagcagtt
gtgggacacctaaggaaattcttggtggatcatagtgttcttcctctttttgagaggact
tacaatgcaacaatctcacaagatcgccaatctgatacttgggcggacaagtcattgttg
catggtacttctcagactggaatgggaagcgattattctcttccagcgaagagggagtct
ttgtaccttgatcgagaaactcagatggaacactctggacttccaatgtatggtcaagaa
catggactctcaggaatacgctcttcaggacttggacgtgctggtgctcctattgttact
cagattgcacaaacaatgcaaataccactgtcatatgctgaggacatcattgggattgga
ggggctaatattgcatatattcgccgtaccagtggagccattctaacagtgcaagagagt
aggggcctgccggatgaaatcactgtggaaattaaaggcacctcatcccaggtccaaaca
gctcaacaactaatccaggaatttataagcaatcacaaagaaccagttccaagcagctac
gggaagatggacagtggcttgaggtcttcatactcacagttgggcaacacatcttactct
tcatcctcgctgtcgtcacaaccctatggtggtggctatggatcttctggagtaggaggc
tacagcagttacaggctttga
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