Vitis riparia (riverbank grape): 117925283
Help
Entry
117925283 CDS
T07274
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117925283
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117925283
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117925283
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
117925283
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117925283
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117925283
Prokaryotic type
117925283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Seryl_tRNA_N
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
117925283
NCBI-ProteinID:
XP_034700151
LinkDB
All DBs
Position
11:17679902..17683814
Genome browser
AA seq
571 aa
AA seq
DB search
MAEDSVPPVDQMALATLNDDVSTPFVKAQFSDRVLIRTILSRPDGGASLAGQTVKVGGWV
KTGREQGKGSFAFLELNDGSCPANLQVIVDAAVAPLGQLVQTGTCVHVEGLLKVPPEGTK
QRVELRVEKVHHVGPVDPAKYPLPKTRLTLEFLRDFVHFRPRTNTISAVARIRNALAYAT
HTFFQNHGFLYIHTPIITTSDCEGAGEMFQVTTLISDAEKVEKELIKNPPPSEADIEAAK
ALVKEKGGAVAQLKSAKASKGEITASVAELNKAKENLSRLEERSKLKPGIPQKDGKIDYS
QDFFARQAFLTVSGQLQVETYACAVSSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD
LKDDMNCAEAYVKFLCQWLLDNCIDDMEFMAKNFDKGCIDRLRMVASTPFERISYTEAIK
LLEEAVKKDKKFENKVEWGIDLASEHERFLTEVLFKKPVIVHDYPKGIKAFYMRLNDDMK
TVAAMDVLVPKVGELIGGSQREERYEVIEKRILDMGLPLEPYEWYLDLRRYGTVKHCGFG
LGFERMILFATGIDNIRDVIPFPRYPGRADL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggattctgtgccgccggttgaccaaatggcgttggcaaccctaaacgacgac
gtttccactcccttcgtcaaggcccagttctccgaccgtgtcctgatccgcaccattctc
tcccgacccgacggcggcgctagcctcgccggtcagaccgtaaaggtcgggggttgggtc
aagaccggtcgggagcaaggcaagggttcgtttgctttccttgaactcaatgacgggtcc
tgtccggcgaaccttcaggtcatcgtcgacgccgccgtggcgcctctgggccagctcgtg
cagaccggcacgtgcgtgcacgtagagggcttgctcaaggttcctcctgaggggacgaag
cagagggtggaactcagggttgagaaggtccatcacgttggtcctgtggatccagccaag
tatccgttgcctaagaccaggcttaccctcgagtttctaagagattttgttcactttcga
ccaagaaccaacacgatttctgcagttgctagaatccgtaatgcattggcttatgctacc
cacacattcttccaaaatcatggatttctctatatacacactccaattatcaccaccagt
gattgtgagggtgctggtgaaatgtttcaagttacaaccttgattagtgatgcggaaaag
gtggaaaaggaacttattaagaatcctcctccatcagaagctgacatcgaagctgccaag
gcacttgttaaggagaaaggaggggctgttgcccaactcaaatctgctaaagcaagtaag
ggggaaatcaccgcatctgtggctgaacttaacaaggctaaggagaatctctcaaggctg
gaagagcgatctaagcttaagcctggtatccctcaaaaagatgggaagattgattattcc
caggatttctttgcccgtcaagcatttttgaccgtttctggccaactgcaagttgagact
tatgcatgtgccgttagcagtgtctatacatttgggccaacttttcgagctgaacactct
cacacctcaaggcatttggcagaattctggatggtggagcctgaaatagcatttgcagat
cttaaggatgatatgaattgtgcggaggcctatgtgaaatttctttgccagtggttactt
gacaattgcattgatgatatggaattcatggctaaaaattttgataaaggctgcattgat
cgtctaagaatggttgcgtcaacgccctttgagcgaatttcatacacagaggcaatcaaa
cttctggaggaagctgtcaagaaagataagaaatttgagaataaagtggaatgggggatt
gatttagcatctgagcatgaaagattcttgacagaggtattatttaagaagcctgttatt
gttcatgattacccaaaaggaattaaagcattctacatgaggcttaacgatgacatgaag
actgtagctgctatggatgttcttgtaccaaaggtgggagaattaattggggggagccaa
agggaagagagatacgaggttattgagaaaaggattttggatatgggacttccccttgag
ccatatgagtggtaccttgacttgaggcgctatggaactgtaaaacattgtgggtttggt
ttaggcttcgaaagaatgatcctttttgccactggcatcgacaacatacgagacgttatt
cccttccccagatacccaggaagagcagatctttaa
DBGET
integrated database retrieval system
