Vitis riparia (riverbank grape): 117925347
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Entry
117925347 CDS
T07274
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00061
Fatty acid biosynthesis
vri00620
Pyruvate metabolism
vri00640
Propanoate metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01200
Carbon metabolism
vri01212
Fatty acid metabolism
Module
vri_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
117925347
00640 Propanoate metabolism
117925347
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117925347
Enzymes [BR:
vri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
117925347
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
117925347
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-GeneID:
117925347
NCBI-ProteinID:
XP_034700237
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Position
11:complement(6908271..6923849)
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AA seq
525 aa
AA seq
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METTMNVCKSVISPPGLFVGTPQGIRSSQCSFMVGKKVNFPRQVAQVAQVRSKSKKHGGA
LGATCRNDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDRDALHVKLADESVCIGEAP
SSQSYLLIPNVLSAAISHGCTMLHPGYGFLAENATFVEMCREHGINFIGPNPDSIRVMGD
KSTARDTMKNAGVPTVPGSDGLLKSTEEGIKLANEIGYPVMIKATAGGGGRGMRLAKEPD
EFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKFGNVVHFGERDCSIQRRN
QKLLEEAPSPALTSELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV
EHPVTEMISSVDLIEEQIRVAMGEKLHYKQEDIVLRGHSIECRINAEDAFKNFRPGPGRI
TAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTVITGV
PTTIDYHKLILDIEDFRNGKVDTAFIPKHEEELAAPLAIVNATVA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaccatgaatgtttgcaaatccgtaatctcgcctccaggcttatttgtgggg
acacctcaaggaatcaggagttctcaatgtagttttatggtgggaaagaaggtgaacttt
cctaggcaagtagctcaggttgcacaagttcgcagtaagtctaagaaacatgggggagct
ctaggtgctacatgtcgtaatgacaaaatcctggtggcaaacagaggagaaattgctgtg
cgtgtgattcgaactgctcatgagatggggataccttgtgttgcagtttactcaaccata
gacagggatgcgcttcatgtaaaattggctgatgaatcagtttgcataggtgaagcacca
agcagtcaatcgtatttattgatcccaaatgttctatcagctgcaataagtcatggatgt
acaatgcttcaccctggatatgggttccttgctgaaaatgcaacttttgttgaaatgtgc
agagagcatggaatcaactttattggacctaatcctgacagtattcgtgttatgggtgac
aaatcaactgctagagacacaatgaagaatgccggtgttcctactgtaccaggaagtgat
ggattgttaaagagcacagaagaaggtatcaagcttgccaatgagattggctatcctgtg
atgatcaaggcaacagctggtggtggaggacgtggaatgcgccttgctaaagaacctgat
gagtttgtgaaattgttacagcaagcaaagagtgaagctgcagctgcatttggaaatgat
ggagtttatctggaaaaatacattcaaaatccaaggcacattgagttccaggttcttgca
gataagtttggaaatgtggtccactttggagagcgtgattgcagcattcagagaaggaac
cagaagctcttggaagaagcaccgtctcctgcattgacctcagagttgcggaaagccatg
ggtgatgcagcagttgcagcagcagcatctataggttatattggtgttggcacggttgag
ttccttttggatgaaagaggttccttttactttatggaaatgaatactaggatccaggtt
gagcatcctgtgacagaaatgatttcgtctgttgacttgattgaggaacaaattcgtgta
gctatgggagagaaacttcactacaaacaggaagacattgtgcttagaggtcattcaatt
gaatgccgtattaatgctgaggacgcttttaaaaacttcagacctgggccagggagaata
acagcatacttgccggctggaggcccatttgtgagaatggatagccatgtttatcctgat
tatgtggttcccccaagctatgattcccttcttggaaagcttattgtatgggctccaaca
agggagagggcaattgaacgcatgaaaagggctcttaatgacactgttattacaggggtt
cctacaaccattgattaccataaacttatacttgatattgaggacttcagaaatggcaag
gttgatacagcctttattcctaagcatgaggaggagttagcagcgcccctagcaatcgtg
aatgcgacagtagcttga
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