Vitis riparia (riverbank grape): 117925477
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Entry
117925477 CDS
T07274
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00330
Arginine and proline metabolism
vri00480
Glutathione metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri04148
Efferocytosis
Module
vri_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
117925477
09106 Metabolism of other amino acids
00480 Glutathione metabolism
117925477
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117925477
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
117925477
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
YKR011C_N
Motif
Other DBs
NCBI-GeneID:
117925477
NCBI-ProteinID:
XP_034700385
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All DBs
Position
11:complement(15984653..15986121)
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AA seq
411 aa
AA seq
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MSASASLQLRLGATQLKNWDVHRVSGDGFTALIRSISQKQKDREPFYILDLGAVVRLMDM
WKQALPNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIETVMALGVGAQQIVYANPC
KGESHIKYAASVGVNLTTFDSMQEIDKIKMWHKKCDLLLRIKAPNDEKGSWRSLGAKFGA
LREEVVPLLQHANAAGLRVIGVSFHVGSKVNDPQVYRGAIGSARGVFDAAAQLKLPPMHV
LDIGGGFQESPTFHEIAAVIKEAINDYFPSSETSEDLKIMAEPGRFFAETAFTLVSNIIG
KRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAKFCSTVFGPTCDSMD
MVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSISTFLTYVYRP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctccgccagcctccaactccgattgggtgcgacccagctcaagaattgggac
gttcaccgagtatcaggagatggatttacggctctcatccgatcaatttcacagaaacaa
aaggatcgtgagccattctacatattggatttgggagctgtagtgaggctcatggacatg
tggaaacaagctcttcccaacgtggtgccatactatgctgttaaatgcaattgccaacct
ccattgatcactgcgcttgcctcactgggcgcaaacttcgactgcgcaagtcgtgctgag
attgagacggtgatggcacttggagttggtgcccaacagattgtgtacgccaatccatgt
aagggcgagtcccatataaagtacgcagccagtgtgggggtcaacctcaccaccttcgac
tccatgcaggagattgataagattaaaatgtggcataaaaaatgcgacttgctgcttcga
atcaaggctccgaatgatgagaaaggttcatggcgttcgcttggagccaaattcggagca
ctgcgggaggaggtggtgccacttcttcagcacgccaatgcagcggggctgagggtaatt
ggggtgtcattccacgtggggtctaaagtgaatgacccccaagtgtaccgtggagcaata
ggttctgctaggggtgtgttcgacgcagctgcccagctgaagctgcctccaatgcatgtt
ctcgacattggaggggggttccaggaaagcccaacgttccacgaaattgctgcagtcata
aaggaagccatcaatgattatttcccaagttctgaaacatctgaagatctcaagataatg
gctgagccagggagattctttgctgaaactgcattcacgctggtgtctaatataattggg
aaacgggtgagaggcgagaagagagagtattggattgatgatgggatctacggatccttt
aaccttccagcatatgataagtcgtccatgatggtgaaaccgctgcttggaggatcagag
tggatgaataaggctaaattctgttcgactgtgtttggaccaacgtgtgattccatggac
atggtggtggctgaatctcaactgccggagctgcatatgaatgatgtgctagtgttctat
aacatgggggcatacactgcctccgctggaaccagattcaatggctttgacatatcatca
atttccaccttcctgacgtacgtttacaggccataa
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