Vitis riparia (riverbank grape): 117925486
Help
Entry
117925486 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117925486
KO
K15082
DNA repair protein RAD7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117925486
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
117925486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
SAM_Ste50p
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
117925486
NCBI-ProteinID:
XP_034700394
LinkDB
All DBs
Position
11:18873005..18879139
Genome browser
AA seq
904 aa
AA seq
DB search
MTILRSREIVPVETLKKRFMDNSTSSKPNETSTPNSSPSRNSHCSVQEPYMGAHMPDSGS
LSGSASNLRRSRRIASRLSRSEGSGEVAASGGRQNSGVNQVCSVEGRCESGSGNAKGRVL
GSDSVGEEDEVLEVKERVEMAERGLGGLDGSEITELGSKEEERKEPSVSLGSDLGSFVER
TRRSEDMVTVKQSKGKRKLSFEASPLDDEDKGFLGLRSGKKIVKEIMCGVDRIESDGGKY
VVEQERGGEDKGVKVQGHGNGEAAVEELQKDPSANENGSVRGRRRFTGEEKGKGKLVEDD
EPQNRIDAVKLDLNLEFKNVIDNMSADENDAVEGGQRYSREEKGKGILINGDLAPNAVNP
VDFNLESEVKNSVDTAVSESIQLEGNVRLQVQNEVIQTSVTGIASRARTRFRDIARRNAS
RFAHFAPEQEMENHPSREAEIQRPSEGGEKENEDWPGPFSTAMKIIKDREKKQNTQQNSS
SDRNRPAHVIWSPRKVKSGERPKPLAPSLQEMCLEVLAQNGDAITSLESIPDALRHKLSQ
LLCDSRRMNSHILELLVSGSPFEVCVRDCSWLTEEEFARIFKRCDTNSLTVLQLDQCGRC
MTDYVLRATFDMLSNGLPALTTVSLKGACRLSDAGLRALVSSAPMLRSINLSQCSLLTSA
SIKTLAETLGSVLRELYIDDCQGIDAMHILSALEKLEYLEVLSVAGIQTVCDDFIWEFIS
VHGPTMKELVLTDCSRLTDFSLKAIAETCPELRALDLGNLCKLTDSAFGYLASGCQAMQT
LKLRCNSFSDEAIAAFLEISGGSLKELSLNNVSKIGHNTAISLARRSRELIRLDLSWCRN
LTDGDLGFIVDSCLSLRVLKLFGCTQITNMFLDGHSNPQVEIIGLKLTPILKHLKLTDPQ
SFPL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttgaggtctcgagaaatagtcccagttgaaaccctaaagaaacgcttcatg
gataattccacttcctccaagcccaatgagacctcaactcccaattcttcgccttctcgc
aattctcattgttctgtccaagagccatatatgggtgcccatatgcccgattccggttca
ctttcgggttctgcgtccaatctcaggcggagtcgtcgaatcgcttcgagattgagtcgc
agtgagggttccggcgaagtcgcggcgtccggagggcgccagaattccggagtgaatcag
gtgtgctcggttgaggggaggtgtgaatctggttcggggaatgcgaaaggtcgggttctg
ggttctgattctgttggggaggaggatgaggttttggaagtgaaggaaagagtcgagatg
gcagagaggggtttgggtggattggatggatcggaaattacagagttggggagtaaagaa
gaagaaaggaaagagccaagtgtaagtttgggttctgatttggggagttttgtggagagg
actcggaggagtgaagatatggtgactgtgaaacagtccaaaggaaagagaaaattaagc
tttgaggccagtcccttggatgatgaggataaagggtttctgggtttgcggtctgggaag
aaaattgtcaaggaaataatgtgtggagtcgatcgcattgagagtgatggtggtaagtat
gttgttgagcaagaacgtggaggagaagataaaggtgtaaaggttcagggtcatggaaat
ggagaggctgctgtggaagaattacagaaagacccaagtgctaatgagaatggaagtgtt
aggggaaggaggagattcactggagaagaaaaggggaagggaaaattggtggaggatgat
gagccacagaacaggattgatgcagtgaaattggatttgaacttggaatttaagaatgtt
attgacaatatgagtgctgatgaaaatgatgctgttgagggtggacagagatacagcaga
gaagaaaaagggaagggtatattgattaatggtgatttagcaccgaatgcagttaatcct
gtggattttaatttggaatctgaagttaagaattcggttgacactgcagtttcagagtct
attcagttggagggcaatgtaagattacaggttcagaatgaggttatacagactagcgtg
acagggattgcatcaagagcaaggacccggttccgagatatagccagacgaaatgcatct
cgatttgctcattttgcgcctgaacaggagatggagaaccatccctctcgtgaggctgaa
attcaaaggccatcggaaggaggggagaaggaaaatgaagattggcctggtcccttttca
actgctatgaagattattaaggacagagaaaagaagcagaacacacagcagaattccagt
tcagacagaaacagacctgcacatgtgatatggagtcctagaaaggttaagagcggtgag
cgcccaaaaccattggccccctcactgcaagaaatgtgccttgaagttcttgcccagaat
ggtgatgcaatcacctctcttgaaagtatcccagatgcactgaggcacaaactaagtcag
ttgctctgtgattctcggagaatgaacagtcatatccttgagctccttgtcagtggatca
ccttttgaggtgtgtgtgagggattgttcatggctaacagaggaagagtttgcaagaatc
tttaagcgttgtgacaccaacagcttgacagtgctacaacttgaccaatgtgggcggtgt
atgacagattatgttttaagggctacctttgatatgttgtcaaatggccttcctgcatta
acaactgtatccctaaaaggtgcatgccgtctttcagatgcagggctaagagcacttgtt
tcttctgcccccatgttaagatctataaatctcagccagtgctctcttctaacttccgct
tctattaaaactttagctgagacattgggatctgttctgagagaattatatattgatgat
tgccaaggcatagatgctatgcatattctatcggctctggagaaactagaatatttggaa
gtgttgtcagtggcaggcattcaaactgtttgtgatgattttatctgggaattcattagt
gtacatggccccactatgaaggagcttgttttaactgattgttcgagattgactgatttt
tctttgaaagctattgctgagacatgtcctgaattacgtgctcttgacttgggtaacttg
tgcaagttgacggattctgcatttggatatcttgcaagtggttgtcaagcaatgcaaaca
ctaaaactccgctgcaattcattcagtgatgaagctattgctgcatttctagagatctcg
ggggggtctttaaaagagctttctctcaataatgttagcaagattggccacaatacagcc
atatcacttgccagacgctcaagagagttgatacgtttggacctatcttggtgtcgaaat
ttgacagatggggacctgggatttattgtggatagctgcttatcattgagggtgcttaaa
ctttttggatgcacacagattacaaatatgtttctggatggtcactcaaatcctcaggtg
gaaatcatcggattgaagctgactccgatattgaaacatctcaagctgactgatcctcaa
tcatttccactgtag
DBGET
integrated database retrieval system
