Vitis riparia (riverbank grape): 117925516
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Entry
117925516 CDS
T07274
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117925516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117925516
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117925516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
KASH_CCD
GIT_CC
Motif
Other DBs
NCBI-GeneID:
117925516
NCBI-ProteinID:
XP_034700427
LinkDB
All DBs
Position
11:complement(1333664..1354662)
Genome browser
AA seq
388 aa
AA seq
DB search
MPATDTDFDLRSSSQSAFGIGECAFADAGNLEHCAKYLNQTLVTFGFPASLDLFAGDPVS
IARTCNCIYSLLQQRQRDVEFRESANEQRQRLLSDISRLEAKVERLESQLQAKDREIATM
TRTEAKATAAFKAQIEKLQQERDEFQRMVIGNQQVRTQQIHEMKKKEKEYIKLQERLNQV
LMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKTDNDFYKKIVDAYEAKNQELMAENTDLR
ALLRSMQVLTSTGMIDLQVDMRDFLNAPNGLSKQSLVVNERFDTDASQSPLGGRTDVFDL
PFHMARDQIEESLRNKMTSIKERMVQLQDAQKGAEVTSEATERELELEAQLVEARSIIQE
QASIMSKHLAKSERPRESIISSPAEVGV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccactgacacagatttcgatctcagatcttcgtctcagtccgctttcggaatc
ggggagtgcgccttcgcggatgcgggaaacttggagcattgtgccaagtatttgaaccag
acgctcgtgacgttcggattcccggcctcgctcgatctgttcgccggcgatccggtttcg
attgcgcggacctgtaattgcatttactctctgctgcagcagaggcagcgtgatgttgaa
tttagggagtctgctaatgagcagagacagcgacttctatctgacatatcaagattggag
gccaaagttgagaggcttgagtcacagttacaagcaaaagatagggagattgcaaccatg
acccggacggaagcaaaagctacggcagcttttaaggctcaaatagaaaaattgcagcag
gagcgggatgaatttcaaaggatggttattggtaatcagcaagtgaggactcaacaaatt
catgagatgaagaaaaaagagaaggaatacataaaattgcaggagaggcttaaccaagtt
ttgatggagaaaaagaaggaatcgaggtctggcatggagataatgaatcttcttcagaaa
gaagggcgacaacgtgggacatggaatggaaagaagactgacaatgatttctataaaaaa
attgtggatgcctatgaggcaaaaaatcaagagctgatggcagaaaatactgatttgagg
gcattattacggtcaatgcaggttctaacttctacaggcatgattgacttgcaggtggat
atgcgtgatttcttgaatgctccaaatgggttgtccaagcaatctttggttgtcaatgaa
agatttgatacagatgcctcacagtccccattgggtgggaggacggatgtctttgatttg
ccgttccacatggccagagatcaaatagaagaaagtctcagaaataagatgacctctata
aaggagcgcatggttcaattacaagatgcacagaaaggggcagaagttacttctgaagca
actgagagggagcttgagcttgaagctcaacttgttgaggcacggagcataatccaggag
caggcgtcgataatgtctaaacatctagctaagtctgagaggccaagggagtctatcata
tcatcaccagctgaggtaggcgtatga
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