Vitis riparia (riverbank grape): 117925544
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Entry
117925544 CDS
T07274
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117925544
Membrane trafficking [BR:
vri04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117925544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
117925544
NCBI-ProteinID:
XP_034700463
LinkDB
All DBs
Position
11:complement(19714919..19785687)
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AA seq
1847 aa
AA seq
DB search
MENLSPSGHRFRRIPRQSIAANLKLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHY
ESISPVLFQNQIFEGPDTDIETEMQLASARQIKAEDTTDDDIPSTSGRQFSDATFCDSSQ
SKVLKHFGQSPLPAYEPAFDWENERSMIFGQRTPETPTTQYGSGLKISVKVLSLSFQAGL
VEPFYGTICLYNRERRDKLSEDFFFRILPTEMQDACITYEPRGIFYLDVPSASVCLLIQL
EKPATEEGGVTSSVYSRKEPVHLTERERQKLQVWSRIMPYRESFAWAIVPLFDNSMSAAS
GGSTSPSSPLAPSVSGSSSHEGVSEPTAKITLDGKLGYSSRSSVIVEISNLNKVKESYTE
DSLQDPKRKVHKPVKGILRLEIEKLQAGHADLENISESGSVTNDSIDPGDRIADSTFTKC
PSNGSDGPQNSNSKWNFFDGKEIPRNGSNAFGYSDFNADDFQAFDFRSTTRNEPFLQLFH
CLYVYPLTVSLSRKRNLFIRIELRKDDADARRQPLEAMCMREPGVSLQKWAHTQVAVGAR
VACYHDEIKLFLPAIWTPMHHLLFTFFHVDLQTKLEAPKPVVVGYASLPLSTHAQLRSEI
SLPIMRELVPHYLQDSGKERLDYLEDGKNIFRLRLRLCSSLYPINERIRDFFLEYDRHTL
RTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNILT
RVQHESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYD
DVLAMAWFFLELIVKSMALEQTRLFYHSLPLGEDVPPMQLKEGVFRCILQLYDCLLTEVH
ERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLTFL
QIICDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHDDLSQRAKAARILVVLLCKHEFD
SRYQKHEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVVIVILQIVRNLDDASLVKA
WQQSIARTRLFFKLLEECLILFEHRKPADSMLIGCSSRSPSGDGPVSPKYSDRLSPAINN
YLSEASRQEVRPQGTPENGYLWQRVNSHLSSPSQPYSLREALAQAQSSRIGASTQALRES
LHPMLRQKLELWEENLSAAVSLQVLEITEKFSTTAASHSIATDFGKLDCITSVFMSFFSR
NQPLIFWKALFPVFNSVFNLHGATLMSRENDRFLKQVAFHILRLAVFRNDNIRKRAVIGL
LILVRSSFYYFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRRSLEEMA
DEARSPNLLRECGLPENALVVIPEKLSENQWSWSEVKYLSDSLLLALDASLEHALLASVM
TMDRYSAAESFHKLALAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQAL
VGRNDGVWSRDHVTALRKICPMVSREITSEASAAEVEGYGASKLTVDSAVKYLQLANKLF
SQAELHHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYR
VGFYGEKFGKLDKKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADD
LQAGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGTIRARVFDRFLFDTPFTKNGKTQGG
LEDQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRS
SEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFM
AVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgtcacctagtgggcatcggtttcgaagaatacctcgtcagtccattgct
gctaatctgaagttggacccactgcttgatgaaaatttggagcagtggccgcatctgaat
gaacttgttcaatgctacagaactgattgggtaaaggatgaaaacaaatatggtcattat
gaaagcatcagtccagttttgtttcaaaatcagatatttgaagggcctgatactgatatt
gaaacagaaatgcagcttgccagtgcaaggcaaatcaaggctgaagatactactgatgat
gatattcccagcacctcaggaaggcaattttcagatgctactttctgtgattcatcacag
tcaaaagttttaaagcattttggtcaatctcctcttcctgcttatgaaccagcttttgac
tgggaaaatgaaaggtcaatgatatttggtcaaaggactccagaaactccaacaacacag
tatggcagtggattgaagatctctgtgaaagtcctatccttgtcgtttcaagcggggcta
gttgagccattttatggcacgatttgcttgtataatcgggaaagaagagataaattgtca
gaggatttcttttttcgcatattgccaactgaaatgcaggatgcttgcattacttatgaa
cctcgtggcatcttctatttagatgtgccctcagcatcagtttgtctgctgatccagtta
gagaagcctgccacagaagaaggcggggttacttcttcagtttattcgcgtaaagaacca
gtgcatctgactgagagagaaaggcagaaacttcaggtgtggtctcgaatcatgccttac
agggagtcctttgcttgggcaatcgttccattatttgataacagcatgagtgctgcttct
ggtgggtctacttcccccagtagtcctcttgctcctagtgtatcggggtcaagttcccat
gagggtgtttcagagcccactgcaaagatcacattggatgggaaactgggttattcaagc
agaagttctgtcatagttgaaatttcaaacttaaataaagttaaagaaagctacactgag
gactcacttcaggatcctaagcgcaaggttcataaacctgtgaaaggcattttaaggttg
gaaattgaaaagctccaggctggccatgctgatttggaaaatatttcagaaagtgggagt
gtgaccaatgattccattgaccctggggaccgaattgctgattccactttcacaaaatgc
cccagcaatggttctgatgggcctcagaatagcaattccaagtggaatttctttgatgga
aaagaaattccaagaaatggatcaaatgcatttggatattcagattttaatgctgatgat
ttccaagcttttgacttccgcagtacaacaagaaatgaacctttcttgcagctttttcat
tgtctttatgtatatcctttgactgttagtttaagtcggaaaaggaatttgttcatacgg
attgaactcagaaaggatgatgcagatgctcgcaggcagcctttagaggcaatgtgtatg
agggagccaggtgtctcacttcagaaatgggctcacacacaagttgctgttggggctagg
gtggcttgctaccatgatgagatcaaacttttccttcctgctatttggacaccaatgcat
caccttttattcactttctttcatgttgacctgcaaacaaaacttgaagctccaaagcca
gtggttgtaggatatgcttcacttccactatctacacatgctcagttgcgatctgaaatt
tctttaccaattatgagagagctggttccgcattatcttcaagactctggcaaggagagg
ctggattatttggaagatgggaaaaatatttttagattgcggttaagactatgttcatcc
ttataccctattaatgagcgcattagagatttttttcttgaatatgataggcatactctt
cgaacaagccctccctggggttctgaactacttgaggccattaatagtttgaagaatgtt
gattccactgctttgcttcagtttcttcatccaattttgaatatgcttctccatcttata
ggcaatggtggtgaaactctccaggttgctgccttcagagccatggttaatattttaacc
cgggtgcaacatgagtcggttgatgatgctgaaagaaatcgttttctggttaactatgtt
gattatgcttttgatgactttgggggtcgtcagccaccggtttatcctggtttgtccact
gtgtggggaagcttagctcgcagtaaggctaaaggctaccgtgtagggcctgtgtatgat
gatgtcttggcaatggcttggtttttcctcgagctaattgtcaagtcaatggcattagag
cagactcgtcttttctatcatagccttcccttaggtgaagatgttccaccaatgcaattg
aaagagggtgtattcagatgtatattgcagttatatgattgccttctaactgaagttcat
gagcgatgcaaaaagggcttaagcttggccaaacgtttgaacagcagtttggccttcttt
tgttatgatcttttatctattattgagcctcgccaagtttttgaattggtgtctttgtac
ttggacaagttttctggggtatgtcagtcagttctgcatgactgcaagcttacatttttg
cagatcatatgtgaccatgatctttttgtggaaatgccgggcagagatccttcagatagg
aactacctttcatctgtcttgatacaggagcttttccttacgtgggatcatgatgatttg
tctcagcgagcaaaagcagctagaatcttggtagtcctcctgtgcaagcatgagtttgat
tctcgataccagaagcatgaggataaattatatattgcccagttatattttccacttatt
ggccagattctagatgagatgcctgtcttttacaacctaaatgctgttgaaaagcgtgaa
gtagtaatagttattctgcaaattgtgcgcaatctggatgatgcatcacttgtcaaggct
tggcagcaaagcattgctcgaacaagattatttttcaaactcttggaggaatgcctaatt
ctttttgagcacagaaaacctgcagatagcatgcttattggctgtagttctcgcagccct
tctggggatggacctgtgtccccgaagtactcagatagactctcgcctgctattaacaac
tatctatctgaggcatcacgacaagaagtcagacctcagggaacacctgagaatggttat
ttgtggcagagagtcaattctcatttaagctctcccagccagccatattccttaagagaa
gctcttgcacaggcacaatcttctagaattggtgcttcaacccaagcgctaagagaatcc
ttgcacccaatgttaaggcaaaaactggaactttgggaagagaacttgagtgctgctgtc
agtcttcaggttttggaaataactgagaaattttccacaactgcagcatcccacagcatt
gcgactgactttggaaaacttgattgcatcacatccgtatttatgagcttcttctcgcgt
aatcaacctctcattttttggaaagctttatttcctgtgttcaacagtgtcttcaatctt
catggagcaacactgatgtcaagggagaatgatcgtttcttaaaacaagtcgccttccat
attcttcgccttgcagtttttcgaaatgataacatcaggaaaagagctgttattgggctc
ctgatactcgtcaggagctccttctattactttatgcagacagcgaggttaagagtcatg
ttgacaattacgttgtcagagttgatgtctgatgtgcaagtgactcagatgaaatctgat
gggacactggaagagagtggtgaagcacggcgtctgcgaagatcattggaagaaatggca
gatgaagctaggagtcccaacctattaagggagtgtgggctacctgagaatgcccttgtt
gtaattccagaaaaattgtcagagaaccagtggtcctggtctgaggtgaaatacctctct
gacagtcttcttttggcccttgatgctagccttgaacatgcactgttggcttctgtcatg
actatggatagatattcagcagcagagagcttccacaaacttgcattggcatttgcccct
gtcccagatcttcacataatgtggttactgcatttatgtgatgcacatcaagagatgcaa
tcttgggctgaggctgcacagtgtgcagttgctgttgctggtgttgtgatgcaggctctt
gtgggtagaaatgatggtgtctggagcagagatcacgtgactgctttacgtaaaatatgc
cccatggtcagcagggagattacttctgaggcatctgcagcagaagtagagggatatggt
gcttcaaaactcactgtggactctgccgtgaaatacctacagcttgcaaataagcttttc
tctcaagctgagcttcatcatttctgtgccagcattctggaacttgtaattccagtttat
aaaagcaggagggcatatggacagctggccaaatgccacactttgctaactaacatttat
gaatcaatccttgagcaggaatcaagcccaataccattcactgatgccacctactatagg
gtgggattctatggtgaaaaatttgggaagctggataaaaaggaatatgtataccgagag
cctcgtgatgtacggctgggtgacattatggagaaacttagtcatatatacgagtctagg
atggatggtaatcacactctccacatcattcctgactctagacaagtcaaagcagatgac
ttgcaggctggagtctgctatctgcaaataactgctgttgatccagtcatggaagatgag
gatctgggaagcagaagggagagaattttttctctttccactggaaccattcgtgcacgt
gtatttgatcgtttcttgtttgatactccatttacgaaaaatggcaagacccaagggggt
ttggaagaccaatggaaacggcgaacagttcttcagactgagggctcattcccagcccta
gtgaataggctcttggtgattaaatctgaatctctagaattctcccctgttgagaatgca
attggaatgattgaaactcggacagctgcattacgcaatgagcttgaagagcctcgcagc
tctgaaggggatcaactcccacgcctccaaagtctacagagaatactccaaggcagtgtt
gcagttcaagtgaacagtggagtgctgagtgtgtgcacggcctttctttcgggtgagcct
gcaacaaggctgcgttcccaggagcttcagcaactcattgctgctctccttgaattcatg
gctgtatgcaaacgtgccattcgggtacacttcaggttgattggagaggaagaccaggat
ttccacacacaacttgtgaatgggtttcagtctctcactgcggagctatcccactacatt
cctgccatcctctcagaactctga
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integrated database retrieval system
