Vitis riparia (riverbank grape): 117925709
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Entry
117925709 CDS
T07274
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117925709
03036 Chromosome and associated proteins [BR:
vri03036
]
117925709
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117925709
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117925709
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117925709
microRNA pathway
RISC loading complex
117925709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117925709
NCBI-ProteinID:
XP_034700679
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All DBs
Position
11:complement(15794806..15805817)
Genome browser
AA seq
938 aa
AA seq
DB search
MTHMQMKNPEQKHVISTRKPLQNSMNQQTSSEIMPSTEESLENAKRSVGRRKGRRRGKGA
KVELLQDSKLDLSVGSHDSSKGLVFHRRPGYGQLGRKCVVKANHFLAQVPDTDLSQYSVT
ITPEVASRKINKSIMAQLVKLHRDTDLGMRLPVYDGKRVLYTAGLLPFVSKEFTVKLVEE
DEGTGITKEREFKVTIKFVGITSMVQLREFLAGKQVDTPHEIIRIFDIVLNQLAAQRYVS
VGRCLYSPDIKNPQQLGGGLQSWQGFYKSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQ
LLGKDVFSRPLSDADRVKVKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPVDEQ
MNMKSVVEYFQEMYGFTIRYSHLPCLQVGNQRKVNYLPMEACKIIGGQRYTKGLTDKQIT
SLLKVTCQRPRDRETDILQTINQNGYEKDPYAKEFGITVDEKLASVEARVLPAPWLKYHD
TGKEKEYLPQVGQWNMTNKKMINGSTINYWACINFSRSVQESTVSGFCHQLVQMCKVSGM
EFNHEPVIPIHSARPDQVKKALKHVYSAAANKLGGKELELLIAILPDNNGSLYGDLKRIC
DTDLGLISQCCLTKNVYKISNQYLANVSLKINVKMGGRNTVLLDALSSGIPLVSDIPTII
FGADVTHPETGDDSCPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWKDPQGG
TVTGGMIRELLLSFKAATGKKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQ
PPVTFVVVQKRHHTRLFASNHNDKSSTDRSGNILPGTVVDSKICHPSEFDFYLCSHAGIQ
GTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSLVPPAYYAHLAAYRARFYM
EPDKPENAIPNCMRTSNESRVRPLPALNEKVKNVMFYC
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgacccacatgcaaatgaagaacccagagcagaagcatgtgatctctactaggaagcct
ctgcagaattccatgaatcaacaaacatcatcagaaattatgcccagcactgaagaaagc
ttggaaaatgcaaaaaggagtgtagggaggagaaagggaaggagaagggggaaaggagcc
aaagtggagctgttgcaggattccaagcttgatttaagtgttggttctcatgactcaagc
aaaggtctggtgttccaccgcaggcccggttatggtcaattgggaaggaaatgtgtagtt
aaagccaaccatttcctagcgcaagtgccagatacagacttgagtcaatatagtgttacc
ataacccccgaagttgcttctcgcaaaatcaacaaatctatcatggcccagttggtgaaa
cttcacagagatactgacctagggatgaggctccctgtttatgatggaaaacgggtcctt
tacactgctggactgcttccatttgtatcaaaagagttcactgtgaaactggttgaagag
gatgaggggacagggattacaaaggagcgagagttcaaagtgacaatcaagtttgtaggt
atcactagtatggtccaattgcgagagtttcttgctgggaaacaagttgatactccccat
gaaataattaggatctttgatattgtgttaaatcaactagcagcccaaaggtatgtatca
gttgggagatgcttgtattctcctgatattaaaaatcctcagcaactaggcgggggttta
caatcatggcaaggcttctataagagtataaggccaactcagatggggttatcattgaac
atcgatatgtcatcaactgcattcattgaaccattacctgttattgactttgtggctcaa
cttttgggcaaagatgtattttcaaggccattgtcagatgcagaccgtgtcaaggttaag
aaagctcttagaggtgttaaagttgaagttacgcacagaggaaatgtacgaaggaaatat
cggatttcaggactgacatcacaacctacaagggaactaattttcccagttgatgagcaa
atgaacatgaaatcagttgttgagtactttcaggagatgtatggatttaccattcgatat
tctcatctaccttgcctccaagtaggtaaccagaggaaagtgaattacttaccaatggag
gcttgtaagattattgggggacagagatataccaaagggctgactgacaagcagataact
tccttgttaaaagtaacatgccaaagacccagggatcgagaaacagacattttacagacc
attaaccaaaatgggtatgagaaagatccctatgcgaaggagtttggcattactgtggat
gaaaagcttgcttcagttgaagctcgagttctacctgcaccatggcttaaatatcacgat
accggaaaagaaaaagaatatttgccgcaagttggtcaatggaatatgacaaacaagaaa
atgataaatggaagcactatcaattactgggcttgcatcaacttctcacgaagtgttcag
gagagtactgtaagcggtttttgtcatcagctggttcaaatgtgcaaagtttctggcatg
gaattcaaccatgagccagtaattccaatacattcagctagaccggatcaggttaagaag
gccttgaaacatgtatatagtgctgctgcaaacaaacttggaggaaaagagttggagtta
ctcattgccattcttccagacaacaatggctctttgtatggtgatttgaagcggatttgt
gacacagatctggggttgatttctcagtgctgtcttactaaaaatgtctacaagattagc
aaccaatacctggcaaacgtgtcacttaaaatcaatgttaagatgggtggaagaaatact
gtgcttttagatgctttgagttcaggaattcctttggttagtgacattccaacaatcata
tttggagccgatgtaactcatccagagactggagatgactcttgtccatcaattgctgct
gttgtagcctcccaagactggccagaagtcaccaagtatgctggattggtatgtgctcag
gctcatcggcaagaacttattcaagatttgtataaaacctggaaagatcctcaagggggc
acagttactggaggcatgatcagagagcttttactttcatttaaggcagccactggaaaa
aaaccattgaggataatattttacagggatggtgtcagtgaagggcagttctaccaggtt
ctactatatgaacttgatgccattcgtaaggcctgcgcatcattggaacctagttaccaa
cctccagtgacatttgttgtcgtccaaaaacggcatcacactagactctttgcaagcaac
cacaatgacaaaagcagcactgataggagtgggaacatcttacctggtactgtggtcgat
tctaagatctgccatcccagtgagtttgacttttatctatgcagtcatgcaggaatccag
gggaccagccgacccgctcattatcatgttctctgggatgagaacaactttacagcagat
gagatccaatctttgacgaacaacctctgttacacgtatgcaaggtgcactcggtctgtt
tctctagttcctcctgcgtattatgctcatctggcagcctacagagctcgattctacatg
gaacctgataagcctgagaatgcaataccaaattgcatgcgcacgtcaaatgaatcacgc
gtccggcccctgccagcattgaatgagaaggtgaagaatgtgatgttctactgttag
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