Vitis riparia (riverbank grape): 117925721
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Entry
117925721 CDS
T07274
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117925721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117925721
Membrane trafficking [BR:
vri04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
117925721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DegR
ISG65-75
CREPT
BOS1_GOSR2_MEM11-like_N
CCDC178_CC1
GIT1_C
Motif
Other DBs
NCBI-GeneID:
117925721
NCBI-ProteinID:
XP_034700701
LinkDB
All DBs
Position
11:complement(16062875..16067704)
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AA seq
337 aa
AA seq
DB search
MSMKSAQSSYRDRTQEFLNVAERLKKSFSSAAPNAVSSSGAKPDGTRSSLAIQKEFKDRA
SRIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVVKQDITALNAAVVDLQLLCN
SQNESGNISSDTTSHSTTVVDDLKNRLMSATKEFKDVLTMRTENLKVHENRRQLFSSTAS
KESTNPFVRQRPLAAKSTATASSSPPPWANESSSSSPLFPRKQGNVESQPLLQQQQQQQL
VPLQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMEDTLANVEGA
QGQLVRYLNSISSNRWLMIKIFFVLIIFLMIFLFFVA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaagtcagcgcagtcgtcttaccgcgatcgaacgcaagagtttctgaacgtt
gccgagaggctcaagaagtcattctcttcggctgcgccgaatgcggtgagcagtagtggc
gcgaagcccgacggaacgcgatcttcgctcgcgattcagaaggaattcaaagacagggct
tcgcggattggatatgggattcatcagacctcgcagaagctcgccaagctagcgaaattg
gcaaagaggacatcagtttttgatgatccaacaatggagatccaagaattgacagctgtt
gtcaagcaggatattactgcactaaatgcagctgtagtggacctacaactcctttgtaac
tcccaaaatgaaagtggcaacatctcaagcgacacaacctcccattcaacaacagttgta
gatgacttaaaaaatcgcttgatgagtgccacaaaggagttcaaagatgttctcaccatg
cgaacagagaatttaaaggttcatgagaacagaaggcagttattttcttcaactgcttca
aaagagtccacaaatccttttgttcggcagcgtccattggctgcaaaatcaactgccact
gcatcatcatcccctcctccttgggccaatgaatcttcatcctcatctcccctctttcca
aggaaacagggaaatgtggaatctcaaccattgctgcagcagcagcagcagcaacagttg
gttcctctgcaagacagttacatgcagagccgagctgaagctcttcaaaatgtggagtca
accattcatgagcttagcaacatcttcacacaactggctactatggtttcacagcaagga
gagcttgcaatcaggattgatgagaacatggaggatacactggcaaacgtggaaggagca
cagggacaactggtccggtaccttaacagcatatcatccaatcgatggttgatgatcaag
atattctttgtattgattatatttcttatgattttcttattttttgtggcataa
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integrated database retrieval system
