Vitis riparia (riverbank grape): 117925735
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Entry
117925735 CDS
T07274
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117925735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117925735
04147 Exosome [BR:
vri04147
]
117925735
04090 CD molecules [BR:
vri04090
]
117925735
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117925735
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117925735
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117925735
CD molecules [BR:
vri04090
]
Proteins
117925735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
Zeta_toxin
ABC_ATPase
AAA_21
AAA_24
RsgA_GTPase
AAA_15
AAA_30
DUF87
PRK
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117925735
NCBI-ProteinID:
XP_034700721
LinkDB
All DBs
Position
11:complement(17236712..17242475)
Genome browser
AA seq
1238 aa
AA seq
DB search
MGSPEKGELAKRGMERKESKSIVVIFRYADWVDLVLMFLGTVGAIGDGMSTNCLLVFVSS
LMNSLGYGNTQKNHGNFMDEVEKCSLYFVYLALAVMVVAFMEGYCWSRTSERQVLRIRYK
YLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPTFLMHASVFISGLAFAT
YFSWRLSLVAFPLLLLLIIPGMVYGKYLLYLSKKCFKEYGKANSIVEQALSSIKTVYSFT
AERRIVERYSAILDKTTSLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSRLVMYKGESGG
RIYAAGISFILGGLSLGMALPDVKYFTEASVAATRIFDRIDRIPEIDGEDDKGLVLDKIL
GELEFEHVNFTYPSRPDSIVLKDFNLKVQAGKTVAIVGASGSGKSTAIALLQRFYDADHG
VIRIDGVDIRTLQLKWIRGKMGLVSQEHALFGTSIKENIIFGKPNATMDEVVAAAMAANA
HNFIRQLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLV
QNALDQASMGRTTLVVAHKLATVRNADLIAVMNGGCVIEIGSHHDLINKKNGHYAKLAKM
QRQFSCDDQEQNSETRISSVARSSAGRPSTATSSPALFASPLPDDNPKPAISHPPPSFSR
LLSLNSPEWKQGLIGSLSAIAFGAVQPVYALTIGGMISAFFLPSHAEIRARVETYSLIFS
SLTLISIILNLIQHYNFAYMGAHLTKRIRLSMLNKILTFEAAWFDEEQNSSGVLCSRLSN
EASIVKSLVADRVSLLVQTTSSVTIAMVLGLAVAWKLALVMIAVQPLTILCFYTRKVLLS
NISNNVVEAQNQSTQIAVEAVYNHRIVTSFGSVGKVLQLFDEAQEEPRKEAMKKSWLAGI
GMGSALCLTFMSWALDFWYGGKLVESGQISAGDVFKTFFVLVSTGKVIADAGSMTSDLAK
GSTAVASVFEILDRQSLIPGSYNAGDNMAGTKLEKMSGGIEIKKVDFAYPSRKESLVLRQ
FCLEVKPGTSIGLVGKSGCGKSTVIGLIQRFYDADKGTVKVDGVDIRELDLGWYRMHMAL
VSQEPIIYSGSIRDNILFGKLDASENEVVEAARAANAHEFISSLKEGYETECGERGVQLS
GGQKQRITIARAIIRNPIVLLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTI
KKLDSIAFVSEGKVVERGTYAQLKSKRGAFFNLASLQK
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttctccagagaagggtgagttagcgaaaagagggatggaaagaaaggagagcaaa
tctatagtggtaattttcagatatgctgattgggtggacctcgtgcttatgtttctgggc
actgttggagctattggagatggcatgtccacaaactgcttgctggtctttgttagcagt
cttatgaatagcttgggctatggtaacacccaaaagaatcatgggaatttcatggatgag
gttgaaaagtgcagtttatactttgtgtacttggctctagcagtcatggtggtcgctttt
atggaagggtattgctggagtcgaacaagtgaacgccaggtgctaaggattcgatacaag
tacttggaagctgttctcagacaagaagtagggttttttgattcacaagaagcaactact
tcagagatcatcaacagcatatcaaaagatacttctcttatacaagaagttcttagtgag
aaggttcccacatttctgatgcatgcatcagtattcatctcaggacttgcatttgccact
tacttctcatggaggctgtctttagtagccttcccactgctacttctactgattattccc
ggcatggtttatggaaagtacttattgtatttgtccaagaagtgcttcaaggaatatggc
aaagcaaacagcattgttgagcaggctctaagctccataaaaacagtctactccttcact
gctgagaggagaattgttgaaagatattcagcaatattggataaaacaactagtctggga
atcaaacaagggattgccaaaggtcttgctgtaggaagtacagggctttcctttgcaata
tgggctttcctcgcttggtatggaagtcggttggttatgtacaaaggcgaaagcggaggg
cggatttatgcagctggcatttccttcatcttgggtggactatcccttggaatggcactc
ccggatgtgaagtacttcacagaagcttcagttgcagcaacacgaatatttgataggatc
gatcgaattccagaaattgacggtgaagacgacaaggggcttgtattagacaaaattcta
ggtgaactagaattcgagcatgtcaatttcacgtacccttctcgccccgattccatagtc
ctcaaagacttcaatcttaaagtccaagcaggaaaaactgtagctattgttggtgcaagt
ggaagtggtaaatccactgcaattgcattgctgcaacgtttttatgatgcagaccatgga
gtgatccggattgatggtgtggatataaggacattacagttgaaatggataagagggaaa
atgggtcttgtcagtcaagaacacgcactctttgggacctcaataaaggagaacattatt
tttgggaagcctaatgccaccatggatgaagtcgtggccgcagccatggctgcaaatgct
cataatttcatacggcaactcccagaagggtatgaaaccaaggttggtgagagaggggca
cttttatctggaggacaaaagcagcggatcgccatagccagagccattatcaagaaccct
gtgattctcctactagatgaagccacaagtgctcttgattctgaatctgaaacactggtc
caaaatgcacttgatcaagcttccatgggaagaaccacactggtagttgcccacaagctt
gccacagtaagaaatgcagatctcatagcagtcatgaatggtggttgcgtcattgaaata
ggttcacatcatgatcttatcaacaagaaaaatggtcattatgcaaaacttgcaaaaatg
cagagacaattcagctgtgatgaccaagaacagaattccgaaacaaggatttcttcggtt
gcaagaagcagtgccggccggccaagcacagccacatcaagtccagcactctttgcttca
ccattacctgatgacaatccaaaaccagccatatctcaccctcctccttccttctcccgt
cttctctctttaaactctcctgaatggaagcaaggtttgattggaagcctctcagctata
gcctttggggcagtgcaacctgtctatgccttaaccataggtggaatgatttcagctttc
ttcttaccaagtcatgctgaaattcgtgcccgagttgaaacatattctcttattttctcc
tcacttaccctgatttccatcattttgaatctgatacaacattataattttgcttatatg
ggtgctcatctaacaaagagaatccgattgagtatgctcaacaaaatcttgacctttgag
gccgcttggtttgatgaagaacagaactcgagcggggtcttatgctccagactgagtaat
gaagcatccattgttaaatcccttgttgctgatagagtctctcttttggttcaaaccact
tcgtctgtaaccattgcaatggtgctggggctggctgtggcttggaagcttgcgcttgtt
atgatagctgtccaacctctcacaattctatgcttttataccaggaaagttctgctttct
aatatttcaaataatgtagttgaagcacagaaccaaagcacacaaattgcggtagaagcc
gtctataatcatagaattgtgacttcatttggaagtgtgggaaaggttcttcagcttttt
gatgaggcccaggaggagccgaggaaggaagcaatgaagaaatcatggctagcaggaatt
ggcatggggtctgcactctgcctaacttttatgtcttgggctctggacttttggtatgga
ggaaaacttgtggaatctgggcagatatctgctggggatgtgttcaagacatttttcgtg
ttggtgagtactggcaaggtcatcgctgatgctgggagcatgacttctgatctagcaaag
ggctcaacagctgttgcatcagtattcgagattcttgatcggcaatcattaattccaggg
tcttacaatgcgggggacaacatggccggaaccaagttagagaagatgtctggtgggata
gagataaagaaggttgattttgcatacccaagccggaaggagagcctagtgctgcgccaa
ttttgcttggaagtgaaaccaggcacaagcatcggacttgtcgggaaaagcgggtgtggg
aaatcaaccgtgattggattgattcagagattttatgatgctgataaggggacagtgaag
gtggacggagttgacataagggaacttgatcttggatggtacagaatgcacatggccctg
gttagccaagaacctataatatattcaggcagcattcgtgacaacattctgtttggaaag
cttgatgcatcagagaatgaggtggtggaggctgccagagctgccaacgctcacgaattt
atctcgtcactaaaagaaggatacgagactgaatgcggggagagaggggtgcagttatca
ggagggcagaagcagagaataacgattgcaagggcgataatccgaaacccgatagtacta
ttactagatgaggcaacaagtgctctggatgtacaatcagagcaagttgtgcaggaggca
ttggacagaatcatggttggaagaactacaattgtggtggcacacaggctcaacacaata
aagaagctggactcaattgcttttgtctcagaagggaaggtggtggaacgtggaacctat
gctcaactaaaaagcaaacgaggtgccttcttcaatcttgctagccttcagaagtag
DBGET
integrated database retrieval system
