Vitis riparia (riverbank grape): 117926014
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Entry
117926014 CDS
T07274
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117926014
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117926014
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117926014
NCBI-ProteinID:
XP_034700995
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Position
12:15351626..15353128
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AA seq
395 aa
AA seq
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MGLKLNIAGTSLLLLLASAAEVSGDIIFDVTKYGARADGHSDISQALLKAWGDSCSSPVA
STVMIPNGTYALGQITIGGPCKAPINFVVQGTVMAPVDTSRFKAEAGWIAFQQIDQFTLS
GGGVFDGQGKTVWGTKCPHYAYCKQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKN
LAFYNVAISAPDESLNTDGIHIGRSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGP
GHGISVGSLGKYPNEEPVVGISVKNCTLTNTQNGVRVKTFPASHQGIASEMHFEDIVMNN
VGNPIIIDQEYCPHNQCNLKSPSRIKLSNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVEL
GDINLKYNGKEGPAMSQCKNIKPNLLGVQLPRICA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaattgaatatcgctggaacctctcttctgctattgctagcctctgctgca
gaagtgtctggtgatatcatttttgatgttaccaaatatggtgccagggctgatggacac
tccgatatcagccaggccttacttaaagcatggggagactcttgttcatcgcctgtggca
agtacagttatgattccaaatggaacatatgcgttggggcaaataaccattggaggccct
tgtaaggctcctattaatttcgttgtccaaggcactgtgatggccccggtggataccagc
aggttcaaggctgaagctggttggattgcgtttcaacaaatcgaccagttcacattgtct
ggcggtggagtttttgatggtcaaggaaaaactgtatggggcacaaaatgcccccattat
gcatattgcaaacaacttcccatcaatctgaggttcaacttcatcaccaatagcatggtc
aaggacataacttcaagagacagcaaacagtttcatattaatcttttggggtgcaagaat
ttagctttctacaacgttgcaatcagtgcaccagatgagagccttaacacagatggaatt
cacattggacgttcctcggggatcaatatcaccgattcaaccatagaaactggagatgat
tgcgtctcaattggtgatggcagtgagcaaattaatatccaaagagtaacctgtgggcct
ggtcatggcatcagcgtgggaagtctaggaaagtaccccaatgaagaacctgtggttggc
attagtgtcaagaactgcaccctcaccaacacccagaatggcgtgagagtgaagacattt
cctgcttcccatcaaggcattgcctctgaaatgcattttgaagatattgtcatgaataat
gttggcaatcccataatcatagatcaagagtactgcccccataaccaatgcaacttgaag
agtccatcacgcattaagctcagcaatgttagcttcagaaacatccggggcaccacctca
actcaggttgctgtcaagcttctttgcagccagggagtaccatgccaagacgtggaactt
ggtgacatcaacctgaaatacaatggaaaggaaggccctgccatgtcacagtgtaaaaac
attaagccaaatctattgggcgtgcaactgccaaggatttgtgcataa
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