KEGG   Vitis riparia (riverbank grape): 117926269
Entry
117926269         CDS       T07274                                 
Name
(RefSeq) zinc finger protein MAGPIE-like
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vri03000]
    117926269
Transcription factors [BR:vri03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    117926269
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-C2H2_STOP2_C zf-met zf-C2H2_6
Other DBs
NCBI-GeneID: 117926269
NCBI-ProteinID: XP_034701246
LinkDB
Position
12:complement(19580935..19583782)
AA seq 454 aa
MLQKMAAEAIPNGFIQNPIGGSNPPTSKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCE
ICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGI
KKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAF
CDALAEETARVTAASNINNGTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGL
SLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPSSYQLSWVFGSKQS
SNNTEDQLTSSTSLPLSNVKEAAGSQIASVPSLYSSQHHSHQTHLGNMSATALLQKAAQM
GATSADPFLGSFGLKCDSSLVQDGNKFCGLYTANQLPTNDMENPKDLSTFNQLQMYPAKR
RNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgttgcagaagatggctgcagaagcaattccaaatggtttcattcaaaatccaattggt
ggatccaatcctcccaccagcaagaagaagagaaaccttccaggaaccccagatcctgaa
gccgaagtcatagccttgtcaccgaagacactcatggccacaaacagattcttatgtgag
atatgtggaaaaggttttcagagggatcaaaacctgcaactgcatcggcgaggacacaac
cttccttggaagctcaagcaaaggagcagcaaggaacccaggaagcgtgtctatgtctgt
cccgaaaagacctgtgtccaccaccacccttcgagggctctaggagacctgactgggata
aaaaagcacttctgtcggaagcacggggagaagaagtggaagtgcgagaagtgctcaaag
cgatacgccgtgcagtcagactggaaagctcacaccaaaacttgcggcactagggaatac
aaatgtgactgtggcactctattttcaaggcgagatagcttcatcactcatagggccttc
tgtgatgccctagcagaagagacggctagagttactgctgcctccaacatcaacaatggc
actatcaattatcatttcatggggacttcacttgcaccaagcatgccacaacatttctcc
tctatcttcaagcctatctcaagcaacgacgaagcaaccgatcaaacaagacggggactc
tccctgtggatgggccaaggatctcaaggccatgaaacaatggggacgaatctccaagag
attcatcaactcagatcctcaatgagtccaggttcggtgtatgctgacccacttgtttct
tgttcaaatcctccaccatcaagctatcaattgagttgggtgtttggaagcaaacagtct
tcaaataacacggaagatcaactaacaagcagtacttcacttccattaagcaatgttaag
gaagctgcaggaagtcagattgcgagtgtcccttccttgtacagctcccaacaccactcc
catcaaacacatctaggaaacatgtctgcgacagccttattgcagaaagctgcccaaatg
ggagcaacttctgctgatcctttccttgggagctttgggttgaagtgtgacagtagtcta
gttcaagatggaaacaaattttgtgggttgtatactgcaaaccaacttccaaccaacgac
atggagaatccgaaggatctctccactttcaatcagttgcaaatgtaccccgcaaaacgc
cgcaacacccagaacgatgacagtactgggggccaaactagagatttcttaggtgttggg
gtgcaaaccatctgccacccatcttcaatcaatggatggatgtga

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