Vitis riparia (riverbank grape): 117926269
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Entry
117926269 CDS
T07274
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117926269
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117926269
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117926269
NCBI-ProteinID:
XP_034701246
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Position
12:complement(19580935..19583782)
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AA seq
454 aa
AA seq
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MLQKMAAEAIPNGFIQNPIGGSNPPTSKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCE
ICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGI
KKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAF
CDALAEETARVTAASNINNGTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGL
SLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPSSYQLSWVFGSKQS
SNNTEDQLTSSTSLPLSNVKEAAGSQIASVPSLYSSQHHSHQTHLGNMSATALLQKAAQM
GATSADPFLGSFGLKCDSSLVQDGNKFCGLYTANQLPTNDMENPKDLSTFNQLQMYPAKR
RNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaagatggctgcagaagcaattccaaatggtttcattcaaaatccaattggt
ggatccaatcctcccaccagcaagaagaagagaaaccttccaggaaccccagatcctgaa
gccgaagtcatagccttgtcaccgaagacactcatggccacaaacagattcttatgtgag
atatgtggaaaaggttttcagagggatcaaaacctgcaactgcatcggcgaggacacaac
cttccttggaagctcaagcaaaggagcagcaaggaacccaggaagcgtgtctatgtctgt
cccgaaaagacctgtgtccaccaccacccttcgagggctctaggagacctgactgggata
aaaaagcacttctgtcggaagcacggggagaagaagtggaagtgcgagaagtgctcaaag
cgatacgccgtgcagtcagactggaaagctcacaccaaaacttgcggcactagggaatac
aaatgtgactgtggcactctattttcaaggcgagatagcttcatcactcatagggccttc
tgtgatgccctagcagaagagacggctagagttactgctgcctccaacatcaacaatggc
actatcaattatcatttcatggggacttcacttgcaccaagcatgccacaacatttctcc
tctatcttcaagcctatctcaagcaacgacgaagcaaccgatcaaacaagacggggactc
tccctgtggatgggccaaggatctcaaggccatgaaacaatggggacgaatctccaagag
attcatcaactcagatcctcaatgagtccaggttcggtgtatgctgacccacttgtttct
tgttcaaatcctccaccatcaagctatcaattgagttgggtgtttggaagcaaacagtct
tcaaataacacggaagatcaactaacaagcagtacttcacttccattaagcaatgttaag
gaagctgcaggaagtcagattgcgagtgtcccttccttgtacagctcccaacaccactcc
catcaaacacatctaggaaacatgtctgcgacagccttattgcagaaagctgcccaaatg
ggagcaacttctgctgatcctttccttgggagctttgggttgaagtgtgacagtagtcta
gttcaagatggaaacaaattttgtgggttgtatactgcaaaccaacttccaaccaacgac
atggagaatccgaaggatctctccactttcaatcagttgcaaatgtaccccgcaaaacgc
cgcaacacccagaacgatgacagtactgggggccaaactagagatttcttaggtgttggg
gtgcaaaccatctgccacccatcttcaatcaatggatggatgtga
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