Vitis riparia (riverbank grape): 117926335
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Entry
117926335 CDS
T07274
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117926335
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
90S particles
Other 90S particles
117926335
Pre-60S particles
Other pre-60S particles
117926335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
TOR1L1_N
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
117926335
NCBI-ProteinID:
XP_034701318
LinkDB
All DBs
Position
12:13968..30912
Genome browser
AA seq
1273 aa
AA seq
DB search
MATIEMEVPQFQIDETDFCGSILSRFSNSTQEEHQHLCTVLGTMSQELKDQNLSTTPVTY
FGVTCSSLDRLSSDPDSPTHSIDSLLTILSMVLPRISPVILKKKREFLSELLVRVLRSKS
PPAASGLKCISHLLMIRESDNWSDVSQLYGVLLRFITDSHSKVRRQSHVCIHDTLQSFQG
SSALAPASEGITNIFERYLLLAGGSNAAASESPKGAQEVIYILDALKDCLPLMSMKFTTT
VLKYLKTLLELHQPLVTRRVLDSLNALCVHPTSEVSPEVLLELLCSLALSVSGNERTVDD
ITFTTRLLDVGMRKVHSLNRKICIVKLPVIFNALRDVLASEHEEALHAATEALKSLIHAC
IDVSLIKQGVNQITMNADMETRRSGPTIIEKLCATIKSLLDYRYSTVWDMSFQVISTMFN
KLGENSSYLLMGTLKALADIQKLPDEDLIYRKQLHECVGSALVAMGPEIFLSILPLKLEV
EDLAEANVWVLPVLKQYTVGAHLSFFRGSILNMVRLMKQKSRMLDLEGRIVSSRSYDALV
YSLWSLLPSFCNYPLDTAESFKDLEKELCTALCEEPNVCGIICSSLQILIQQNKRILEGK
IDLHGSDTSTSRQRAMAHYTPQAAADNLNALKSSAREFLSVLSGNFLKSAQDGGCLQSTI
CELASIADKEIVTRFFRNTMQKLLKVTQEAGNAETSRNSNTMEIDNSSNGSSLALVRAQL
FDLAVSLLPGLNAKEIDLLFVAIKPALRDDEGLIQKKAYKVLSIILRNCDTFLSAKFEEL
LKLMIEVLPSCHFSAKHHRLECLYSLIVHASKCESEKRCDIISSFLTEIILALKEANKKT
RNRAYDMLVQIGHACRDEEKGGKKENLHQFFNMVAAGLAGETPHMISAAVKGLARLAYEF
SDLVSTAYNVLPSTFLLLKRKNREIAKANLGLLKVLVAKSQTEGLQMHLRSMVEGLLNWQ
DITKNHFKAKVKLLLEMLVKKCGLDAVKAVMPEEHMKLLTNIRKIKERKERKLEANSEEI
RSQQSKATTSRLSRWNHTKIFSNFGDGESEDSDAEYSDDQTLFGQQSKATYYNSKASSSR
MHKAAKRLPEDLFDQLEDEPLDLLDQHKTRSALRSTGHLKRKPGLEDEPEVDSEGRLIIR
EGGKPRKEMPSNSDSDVRSQASSHMSMNSARDNRKRRKTSDSGWAYTGGEYASKKAAGDV
KRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMVSVVKLTKKLEGKSASSALLSSKGLRF
KRVQKKSSKKKSK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatcgaaatggaggtacctcaattccaaatagacgaaacagacttctgtggt
tcaatcctctctcggttctctaactccacccaggaagagcatcaacatttatgcacagtt
cttggaaccatgtctcaggaactcaaagaccagaacctctctacaaccccggtaacctac
tttggtgtcacatgctcttctctagaccgactttcatctgatcctgattcgcccactcac
agtattgattctctcctcaccatcctctccatggtccttccaagaatctctcctgtaatt
ctgaagaagaaaagagaatttctgtcggagctgctggttcgggtccttcggtctaaatca
cctccagcagcatcagggctgaaatgcatttcacatttgttgatgatcagggagagtgac
aattggtcagatgtatctcagctctatggagttcttcttagatttataacagattcacac
tccaaggtgagaaggcagtcacatgtatgcatccatgacacactacaaagttttcaagga
tcatcagctctggcacctgctagtgaagggattacaaacatttttgaaagatatcttcta
cttgctggtgggtcaaatgcagctgcatctgaaagccccaaaggagctcaggaggttatt
tatattctggatgctttaaaagactgtcttcctcttatgtctatgaagttcacaactact
gtccttaagtatttaaaaactctcttggaactgcaccaacctcttgttactaggcgcgta
ctggacagcttgaatgcactttgtgttcacccaacttcagaggtttctcctgaagtgctg
ctcgaactgttatgttcattagctctttctgtctctggaaatgagagaactgtagatgat
attacattcacgactcggttgctggatgttgggatgagaaaagttcattcccttaataga
aaaatatgcatagttaagctccctgttatattcaatgcacttagagatgttttggcatct
gaacatgaggaggccttacatgcagctacagaggcacttaaaagcttaatacatgcttgc
attgatgtaagcttgataaagcagggagtcaatcagattacgatgaatgcagacatggag
acaagaaggtctgggccaaccatcattgagaagttgtgtgcaaccatcaaaagcttacta
gattatcgttactctacagtatgggacatgtcatttcaagttatctcaacaatgtttaat
aaattaggggaaaattcttcttacctcttaatgggaaccctcaaggccttggcagacata
cagaagttaccagatgaagacctcatctacaggaaacagctgcacgaatgtgttggatca
gctcttgttgcaatgggacctgaaatttttttaagtattctacctcttaagttggaggtt
gaagacctagctgaggcaaatgtttgggtcctcccagttctaaagcagtatacagttggt
gctcatttaagcttctttagagggtcaattttgaatatggttaggctcatgaagcagaaa
tctcgaatgcttgatctagagggacgaattgtttcatcaaggagctatgatgcacttgta
tactctctatggtctttgttgccttcattttgcaactaccctttggatactgctgaaagc
ttcaaggatctggagaaagaattatgcactgctctctgtgaggaacccaatgtttgtgga
ataatatgctccagtttgcagattctcattcaacagaataaaaggattctggaaggaaaa
attgatctgcatggttctgatacgagcacttccagacaaagagctatggcccattatacc
ccacaagctgcagctgataacttgaatgcattaaaatcctctgcccgtgaatttttgtca
gttttgtcagggaacttcttgaaatctgcacaagatggtggttgtttgcagtccacaatc
tgcgagttggcttctatagcagataaagaaatagtcacaaggttcttcagaaatacaatg
cagaagcttctgaaggtgactcaagaggctggcaatgcagagacttctagaaactccaat
actatggagattgacaattcatcaaatggaagttcactagcacttgtgagggcacagctt
tttgacttggcagtgtcacttttgcctggtttgaatgccaaagagattgatctgttgttt
gttgcaataaagccagcattaagggatgatgaaggtttgatccaaaagaaggcatacaaa
gttctttcaattattctcaggaactgtgatactttcctttcagcaaagttcgaggaattg
ctcaaacttatgattgaagtgctgccttcctgtcatttttctgctaaacatcacagattg
gagtgtttgtactctctaatagtccatgcatccaagtgtgaatcagaaaagagatgtgat
atcatcagttctttcctaactgagataatccttgccctgaaagaggctaataagaaaaca
agaaacagagcttatgacatgcttgtccaaattggccatgcatgtagggatgaagagaaa
ggtggaaaaaaggaaaacctgcatcaattctttaacatggtagctgcaggcctggctggt
gaaacccctcatatgatcagtgctgcagtgaaaggcctagctcgtttggcttatgagttt
tctgaccttgtttcaactgcttacaatgtgcttccatccacatttcttctcctaaagaga
aagaaccgagagattgctaaagctaatttaggtttgttgaaggtgttggtggccaaatca
caaactgaggggttgcagatgcacttaaggagcatggtagagggcctgctgaactggcaa
gatatcaccaaaaaccatttcaaagctaaggttaagcttcttttggaaatgctggttaag
aaatgtggtctggatgctgttaaggctgttatgcctgaagaacacatgaaacttcttact
aatataaggaagatcaaggagcggaaagagaggaaacttgaagcaaactctgaagagatt
agatctcaacagtcaaaagcaacaacatccaggcttagcagatggaatcataccaaaata
ttttccaactttggggatggagaaagtgaggacagtgatgcagaatattcagatgaccag
actctatttggtcaacagagcaaggctacctattacaactccaaagcatcttcatcacga
atgcataaagcagccaagagattgccagaagacttgtttgaccaattagaagatgagcca
cttgacttgctggaccagcacaagacaaggtcagcacttcgatcaacagggcacctaaaa
cggaagccaggattagaagatgagccagaggtagactctgaagggcgcctgataattcgt
gagggaggaaagccaaggaaagagatgccctctaactctgattcagatgtaaggagtcaa
gcaagtagtcacatgtctatgaactctgcaagagataatcgaaagcgcaggaaaacatca
gattcagggtgggcttacacaggaggtgagtatgctagcaaaaaggcagctggggacgtg
aaaagaaaggacaagcttgagccatatgcatattggcccctggatcgcaagatgatgagc
cgtagaccagagcatcgggcagctgcgagaaaaggtatggttagtgtggtaaaactaaca
aagaagctcgaaggcaagagtgcgtcaagtgcactactctctagtaagggcctgagattt
aagagagttcaaaagaaaagcagcaagaagaaaagcaagtag
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integrated database retrieval system
