Vitis riparia (riverbank grape): 117926377
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Entry
117926377 CDS
T07274
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117926377
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117926377
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117926377
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117926377
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117926377
Ion channels [BR:
vri04040
]
Chloride channels
Chloride channel (CLC)
117926377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
117926377
NCBI-ProteinID:
XP_034701356
LinkDB
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Position
12:complement(968773..976663)
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AA seq
777 aa
AA seq
DB search
MDQRDGENDIEIEGVWGDWREMEGNGSDFSDKDTAMREPLLVRKRLNSTSQIAIVGASVC
PIESLDYEIVENELFKQDWRSRKRVQIFQYIVLKWTLALLIGLGTGLVGFFNNLAVENIA
GFKLLLASNLMLKDKYGLAFVTFAGCNMVLAIAAAVLCAYIAPSAAGSGIPEVKAYLNGI
DAHSILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWL
RYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVTSWWRSALLWRTFFTTAVVAV
VLRALIEFCRSGKCGLFGQGGLIMFDVNSSQATYDTPDLLTVIFLGIVGGIFGSLYNFLV
DKVLRTYSIFNEQGPKFRVLLVIVISLLTSCCAYGIPWLAQCKPCPIELKNECPTVGRSG
NYKNFQCQPGHYNDLASLFLNTNDDAIRNLFSNGTQNEFQLSTLVIFFAAVYCLGIITYG
IAVPSGLFIPVILAGASYGRIVGTVAGSLTSLDVGLFSLLGAASFLGGTMRMTVSLCIIL
LELTNDLLTLPLMMLVLLISKTVADCFNKGVYDQIVRMKGFPYMEAHAEPYMRHLVAKDV
VSGPLITFSGVEKVGNILHALKTTGHHGFPVIDEPPFTDAPELCGLVLKSHLLVLLKGKK
FSKTRMLVRSEILKTFEASDFAKAGSGKGVKLEDLDITAEEMEMYVDLHPITNTSPYTVV
ETMSLAKAAVLFRELGLRHLCVVPKTHARPPIVGILTRHDFMPGHIRGLYPHLNSSK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagagatggagagaatgatattgagatcgaaggagtgtggggtgattggagg
gagatggaggggaacggatcggacttctctgacaaggatacggcgatgagggagccgttg
ctcgttaggaagaggttgaatagtacttcgcagattgcaattgtgggagccagcgtttgt
ccgattgagagcttggactacgagattgtggaaaatgaactttttaagcaggactggaga
tctagaaaaagggttcagatatttcaatatattgtgctcaagtggacgcttgccctcctt
atcgggttaggtactgggctggttggcttcttcaacaaccttgcagttgagaatatagct
ggtttcaaacttttactcgctagcaatctcatgcttaaggacaagtatggtctggcattt
gtaacatttgcgggttgtaacatggttttggcaattgctgcggctgtcctctgtgcttac
attgccccttcagctgcgggctctggcatccctgaggtgaaagcatatctcaatggcata
gatgctcattctatattggctccgagtaccctctttgtaaagatttttggctccattctt
ggagtgtctgctggatttgttgtgggtaaggaagggcccatggtccatactggcgcttgc
atagcctctttgcttgggcagggaggatcccgcaaataccatttgacatggaaatggctc
agatacttcaaaaatgacagggatcgtcgtgatttgattacctgtggtgctgcagctggt
gtggctgctgctttccgtgctccagtgggtggggtcctctttgcacttgaagaagtaact
tcatggtggagaagtgctcttctctggagaaccttttttacaacagctgtagtagcagtg
gtgttgagagccctcatagaattttgtcggagtggcaagtgtgggttatttgggcaagga
ggtctgatcatgtttgatgtcaattcgtctcaagccacttatgatacccctgatttactg
actgtcatattccttggaattgtcggtggcatttttggaagcctctacaattttctcgtg
gataaggtccttcgtacatatagcatcttcaatgagcaaggtcctaaatttcgggtcctg
cttgtcattgtcatctccctcctgacatcttgctgcgcttatggtattccatggctggca
cagtgcaagccttgtccaattgagctgaagaatgagtgccccaccgtaggccgctctgga
aactacaagaacttccaatgtcaaccaggccattacaatgaccttgcctccctctttctc
aacaccaatgatgatgccatacgcaacctattcagcaatggcacccaaaatgaattccaa
ctctccacccttgtcattttctttgctgctgtatactgccttggcattattacttatggc
attgctgttccctcggggctatttatccctgtcatacttgctggagcctcctatggtcgc
attgttgggacagttgctggctctctgactagtcttgatgtgggtctcttttcacttctt
ggagctgcctccttcctgggtggcaccatgagaatgacagtctccctctgtatcattctc
ctggaacttaccaatgatctgctaacgctcccattgatgatgctggttctccttatttca
aaaacggttgcagattgtttcaacaagggtgtctatgaccaaatagtgagaatgaagggg
tttccttatatggaagctcatgcagagccatacatgaggcacctggtcgcaaaggatgtt
gtttctggtccattaatcaccttttcgggtgttgaaaaggtgggaaatatactacatgct
ttgaagacaacaggccatcatgggttccctgtcattgatgaaccgcctttcacagatgca
ccagagctgtgtgggcttgttttgaagtctcatttgctggttttactcaaagggaagaag
ttttcaaagacgaggatgttggtcagatcagaaatcttgaaaacatttgaggcgagtgat
tttgctaaggcaggatcaggcaaaggagtcaaactggaggacctggacatcacggccgag
gagatggagatgtatgttgatctacatcctatcactaatacatccccatacacagttgtg
gaaacgatgtctctagcaaaagctgctgtcctctttcgggaactaggccttcgacatttg
tgtgtggtgccaaagactcatgctaggccgccgattgtgggaattttgacaaggcacgac
ttcatgccggggcacatacgagggctctaccctcatttaaactctagcaagtaa
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