Vitis riparia (riverbank grape): 117926452
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Entry
117926452 CDS
T07274
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117926452
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117926452
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117926452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4
zf-C3HC4_3
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117926452
NCBI-ProteinID:
XP_034701438
LinkDB
All DBs
Position
12:19174822..19200870
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AA seq
570 aa
AA seq
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MGTGGNAEFGWFGRRGRLGFAFRVVLGLWVVLAVLRPVTGLRPLRDRAHSWGDEWLYIRK
DENALGPFSYWNITGTYKGSWRFLDSTNSSARFPDFGKSSGNSIIELVSSPTKITGVHYV
QGVIIFHDVFDNEHEVGGSQIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHL
LGVFSSQVFQESPREKIWRKRHSPIYEMEKHCNIEIAAQISRVSSTQNDGDRDRYHLEGL
MESPSVDDDGDCFSPLLLNATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQ
SGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLA
IWKASRPMNNGEGWETMRRELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQ
IITNVIRDSRKPLHPHYILGMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGVFMGLQA
SILLLQHYLGSRCFIPRQILPEKYSYYRRFNQDTNHVTDCVICMTTIDITHRSNECMVTP
CDHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggcggaaatgcggaatttgggtggtttgggaggagggggaggctagggttt
gcgtttcgggtggttttggggttgtgggtcgtgttggccgttcttcggccggtgacgggt
ctgagacctttaagggacagggctcattcgtggggcgatgagtggttatatattagaaaa
gatgagaatgcactgggtccgttttcctattggaacattacaggaacatacaaaggatct
tggaggttcctggattccacaaatagctctgctaggtttccagattttgggaaatccagt
ggcaattctatcattgaattagttagctcaccaacaaaaataacaggtgtacattatgtt
cagggggtgattatattccatgatgtgtttgacaatgaacatgaagttggtggttctcaa
atcagggtagaaggtgtatatatatggccttttagacaacttcgaatggtagccaacagt
ggaaaagagggagagttgagccaggaagaagaatatatattgtctaatccatatcacttg
cttggagttttctcgtcacaggtgttccaagaatctccccgagagaagatatggagaaag
cggcattcaccaatttatgagatggagaaacattgtaatattgaaattgcggcccaaatt
tcacgtgtctcatccacccaaaatgatggagatcgtgatcgttatcacttagaaggattg
atggagagtccttccgtggatgatgatggagattgcttctctcccttactattaaatgct
acttctgtcaacattgaggcctactacaacaaggcagttaactatacgttgatggtcacc
tttgtctcttttcttcaagttcttttgttaattcggcaaatggaacatagcaacactcaa
tcgggggctgccaaagtttcgattttaatgattgggcaacaagccattatggatgcttat
ctctgccttttacatctgactgccggaatactagttgagtccttgttcaatgcttttgca
actgctgcatttttcaagtttgtagtcttctcaatttttgagatgagataccttcttgcc
atatggaaggcaagcagacctatgaataacggagaaggttgggagacaatgaggcgtgag
ctttctgttctgtatagccgtttctatggaatccttttgggaggcattctggttatgtat
gagtttcataattttctgcggcctattcttctccttatgtactccttttggatacctcaa
ataattactaatgttattcgtgattcaagaaagccattgcatcctcattatatcttaggc
atgactgttactcggctagcagttccattatatatgtttggctgccctaacaacttcatg
cgcattgaacctagcaagagttggtgtatttgtttgggtgtatttatgggacttcaagca
tcaattcttcttcttcagcactatcttggatctcggtgtttcattcctcggcagatccta
cctgagaaatatagctactacagacggtttaatcaggatacaaatcatgtgacggactgt
gtcatttgcatgaccaccattgatatcacacatcgttctaatgagtgcatggtgacgcca
tgtgatcattttttccattctggttgtttacaaaggtggatggatataaaaatggaatgc
ccaacatgccggcgtccactgccaccagcctaa
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