Vitis riparia (riverbank grape): 117926514
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Entry
117926514 CDS
T07274
Name
(RefSeq) transcription initiation factor TFIID subunit 15b isoform X1
KO
K13098
RNA-binding protein FUS
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117926514
09122 Translation
03015 mRNA surveillance pathway
117926514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117926514
Spliceosome [BR:
vri03041
]
Complex A
Other components
Complex A specific factors
117926514
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
117926514
NCBI-ProteinID:
XP_034701508
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All DBs
Position
12:14458446..14476245
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AA seq
547 aa
AA seq
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MQIFYSAPHFSFILASSASSSPPNALGSSNHFGNCLAGKVENKGKSGLAEAFISQTLGPF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NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttctattcagctccacacttctcattcatcctcgcttcatccgcttcatct
tctccaccaaatgctcttggcagcagcaaccattttgggaactgtttggctggaaaagtt
gaaaacaaagggaagtctgggctggcggaggcctttataagtcaaaccctaggtcctttc
tctctctatttctctctagaaaaacaagccctaaggaaaaccctagagaacatgtctggt
gtgtacggtcacgacggcgacgaatcgggtcagcctccctcctccggaggctacggcggt
ggcggtggatacggaggaggaggatatggtggcggaggcggtgggggaggttatgggggt
aatagtggtggcggaggtggtggacggggtggagggtacggtggcggtgggggcagagga
ggtggtggaggaggatatgggggtaattcacagaatcgaggaggtggaggtggcggagga
taccaaggaggggatcgtggcggccgaggtggtggcggcggtggaaggggaggtggccgg
ggaggaagcggcagagatggggattggctttgccccaatccaagctgcgggaatctgaac
tttgcaagaagagttgagtgtaacaaatgcggtgcaccctctcctgctggtgcaggcagc
gatcgtggtggtggcggcggctataacagaggaggaagtggtgggggatttggtggtaat
cgagggggaagaggtggtaattatgagggtggcagtggaggcaatagaggtggtaattat
gagggtggtagtagagggggttcttatggtggtaatcaggcaagaggtgggggtggagat
ggtggttttggacaagttcctccagctgcaccccaatcttatggtggtgggtctgctgga
tattatcctcctccaaattcttttggtggaaacactaattatggtggagaggctgttcct
cctccaacaagctacactggtgggcctacatcgtatcccccatcatatggcggccctgcg
agtggttatgatggtctaggtgatacaagaggtggtggtcgggctggtccacctgctggt
ggatatgatggtggatttggtggtcccagacaacagggaggtggttatgctgggggtgga
ggtggaggcagtactactgaggcccctgttaaggtgaagcaatgcgatgaaaattgtggg
gattcttgtgataattcaagaatttacatatcaaatttgccaccggatgtgactgttgat
gaattgagagagctttttggtggcattggacaagttggaagaattaagcagaagcgaggt
tataaggatcaatggccatggaatataaaaatatacactgatgaaggtggaaacaacaaa
ggcgatgcatgtttgtcttatgaggatccttctgctgcgcattctgctggtggtttttat
aacaattatgaaatgaggggctataaaatcaatgttgcaatggctgagaagtctgcacca
agggctccacctgcttttggccatgggggtggtggtagaggtggctatggtggtggggac
cggcgcagagacaattacagggacaatgcaggttctggtccagatagacatcatcatggt
ggaaatcgttcgcgtccatactga
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