Vitis riparia (riverbank grape): 117926622
Help
Entry
117926622 CDS
T07274
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00270
Cysteine and methionine metabolism
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
117926622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117926622
03032 DNA replication proteins [BR:
vri03032
]
117926622
03036 Chromosome and associated proteins [BR:
vri03036
]
117926622
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vri02048
]
117926622
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
117926622
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117926622
DNA replication proteins [BR:
vri03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
117926622
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117926622
Prokaryotic defense system [BR:
vri02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
117926622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DUF5523
Motif
Other DBs
NCBI-GeneID:
117926622
NCBI-ProteinID:
XP_034701678
LinkDB
All DBs
Position
12:complement(871105..886810)
Genome browser
AA seq
1238 aa
AA seq
DB search
MDRTKKGETMLAVFESDDAESSVGATTKPRQKRCSSDSSGSACGSRKKPKKASRHTDCKN
KSVCLLRKSSVNGTKKQPIEKDEQVAVMSTTGENIPRPNRRLTNFVFYDSDERPQPVEML
EICNMYIAGTILPLDESPDEEKEKGIRCEHFGRLESWAISGFEEGSPVIWVSTEIADYEC
IEPRNGYKRIYKNFYEKARACIEVYKKLSKSCGGNPNMSLDELVAGVVSSMAQGRKYLSG
LSIESFVISQGEFIHDQLIGLDETCKQNDHVFSELPVLAALRDKKGKSKGSLPGKAIASG
RVPKRSLRISDEEKKNETKRKVMSATTTKLINRTWGEYYSNYLPEKSEGGRGFQVNEDEE
TGNEDEETGNEDEETGNEDEEMGNENEEEEENMEVDSEVEEEETLLLEKIKKPHSALKPT
KFCSSNEEITWDGQLEDKTCAGETLYKRAIVRGDVVAVGSSVLVEMDDSDGVSPIYFVEY
MFENLDGRKMVHGRLMLRGFQTVLGSSANKREVFLTNDCMVFDLGDVKQTVIMEIRLIPW
GYQHRKANANNDKIDRARAEERRSKGLPLEYYCRSLYWPERGAFFRLPTSTMGLGSGVCQ
SCKIKETQKEKETFKVNKSKTTFTLKGTEYSVKDFVYLRPHYFAADGKAMDTSKSRKNAG
PKPFVVCHLLEIKLSKSFKLADPESTKLKVRRFFRPEDISAEKAHLSDIREVYYSTKIVV
VPVMAIEGKCEVRKKHELPTFNAPAEFQHIFFCQSQYDPDTRAIKKLPARLKLSSSENMD
TDEAACRKRTSECKGGECDKSRLATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEA
FHLNHPDALMFINDCNVILRAIMSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVD
FINGGPPCQGFSGMNRFNQGKWSKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQ
TFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFPGPE
LKINNYAAVRSTATGGPFRAITVRDAIGDLPNISNGACETTMEYPREASSWYQRKFRGDM
SILTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRLSSGRIAKLLPSWLTNKGKRH
NQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSG
QMHHKHRQVGNAVPPPLAFALGRKLKEAVERKHSTQSD
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggacaggacaaaaaaaggtgaaacaatgctcgcagtttttgagtctgatgatgcagaa
tccagtgttggggcaaccaccaaaccaaggcagaagagatgcagctctgacagcagtgga
agtgcttgtggttctaggaagaagccaaagaaagcttccaggcacactgattgtaagaac
aaatctgtttgtttgttaagaaaatcttccgtaaatggaactaaaaagcagcccattgag
aaggatgagcaagtggctgtgatgtcaactactggggaaaatattcctaggccaaacagg
aggctcacgaactttgttttttatgattcagatgaacgaccacagccggttgaaatgtta
gaaatatgtaatatgtacattgcaggtacaatattgcctctggatgaaagtcctgatgag
gagaaggaaaagggtatcagatgtgaacattttgggaggctggaatcttgggcaatttcc
ggatttgaggaaggttcaccagttatttgggtctctactgaaattgcagactacgaatgc
attgaacctaggaatggctataaaagaatatataagaatttctatgagaaagcccgtgcc
tgtattgaagtctacaaaaaattgtcaaaatcttgtggaggaaatcccaatatgagcctt
gatgaactggtagctggagttgttagctccatggctcaaggtaggaaatatttgtcaggg
ttgtctattgaaagctttgttatctcacagggagagtttatccatgatcaactgataggt
ttagatgagacatgcaagcaaaacgatcacgtattcagtgagttgcctgtacttgctgct
ctccgggacaaaaagggaaagagtaagggttctttgcctgggaaggcaattgcatcaggt
agggtgccaaaacgaagccttagaattagtgatgaagagaagaaaaatgaaaccaaaagg
aaagtaatgtcagctacaacaacaaaactgatcaacagaacctggggagagtactactcc
aattacttgccagaaaaatcagaggggggacgtggttttcaagtgaatgaggatgaagaa
acagggaacgaggatgaagaaacggggaatgaggatgaagaaacagggaatgaggatgaa
gagatggggaatgagaatgaagaagaagaagaaaatatggaagtagattctgaagttgaa
gaggaggaaacgttgcttcttgagaaaattaagaaacctcattcagcattaaagccaaca
aaattttgttcttccaacgaagaaattacatgggatggacagctggaggacaaaacatgt
gcaggagagactctttacaaacgagctattgttcgtggagatgtggttgctgttggtagt
tctgtgctggtggaaatggatgactcagatggtgtttctcctatatattttgtggagtac
atgtttgagaatttagatgggagaaaaatggtccacggcagactgatgctgcgaggattt
cagacagttcttggcagcagtgctaataagagagaggtatttctgaccaatgactgcatg
gtatttgatctgggtgatgttaaacaaacagtgatcatggaaatccggttgataccttgg
ggttatcagcatcggaaggctaatgcaaacaatgataagattgaccgggcaagggcagag
gagagaagaagcaaaggattgccattggaatattattgtagaagcttgtattggccagag
agaggtgctttttttcgtctcccaaccagtaccatgggccttggaagtggggtttgtcaa
tcttgtaaaatcaaggaaactcagaaggagaaagaaacctttaaagtgaacaagtccaag
acaacctttaccctcaaaggtactgagtattctgttaaagactttgtctacctccgcccc
cattattttgcagctgatggcaaggccatggatacctcaaagagtaggaaaaatgcgggg
cccaaaccttttgttgtctgccatttactggagatcaaattatccaagtccttcaagctg
gctgatcctgaatctaccaagcttaaagtcaggaggtttttcagaccagaggacatttca
gcagagaaggcacacctttctgatattcgagaggtttactacagtacaaaaatagttgtg
gtacctgttatggctatagaaggaaaatgcgaagttagaaagaagcatgagcttccaact
tttaatgcccctgctgaatttcagcatattttcttctgtcaaagtcaatatgatcctgac
acgagagctattaaaaagttgccagctcgtctcaaattaagctcttcggaaaacatggac
actgatgaagcagcatgtaggaaaagaacaagtgaatgtaaaggaggagaatgtgataaa
agccgcctagccactctagatgtatttgctggttgtggtggcttatctgaaggcttacag
caagctggtgtttcgctgaccaagtgggcaatcgaatatgaagagcctgcaggagaagca
tttcaccttaatcatccagatgcgctgatgttcatcaatgattgtaatgttatcttaaga
gctattatgtcagcttgtggagatgcagatgactgtgtttccacttctgaggccactgag
ttagctgaaaaacttgatgaaaaggacatacgtaatttgcctcggcctggacaagtggat
ttcatcaatggagggcctccttgtcagggtttctctggaatgaacaggtttaaccagggt
aagtggagtaagatgcaatgtgagatgatcttagcatttttatcctttgctgattacttt
cggccaaggtttttcctcctggagaatgtcagaaactttgtaacgttcaacaaagggcaa
acattccggttaaccctagcttcactcctggaaatgggttatcaggtgagattcggagtt
ctagaagctggagcttatggagtcccccaatctcgtcgacgagctttcatatgggcagca
tctcctgaggagacacttcctgagtggcctgagccaatgcatgtttttccaggcccagaa
cttaaaatcaataactatgctgctgttcgcagtacagcaactggtgggccattccgtgca
ataactgtcagagacgcgattggggatctcccaaatattagcaatggggcttgtgaaaca
accatggagtacccaagagaagcttcatcttggtaccaaaggaagtttcgaggagatatg
tcaatcctaacagatcatatctccaagaaaatgaacgagctgaatctcatccgatgtaaa
aaaattccaaaacgaccaggagctgattggcacgcgatcaagaatggaaaggttcgtctg
tcctcagggcgcatagctaaacttctaccttcttggctgacaaacaaaggcaaaaggcat
aaccagtggaaaggagtacttggaaggctggactgggaaggacattttccaacctctatt
acaaaccctcaaccattgggtaaggttggaatgtgttttcacccagatcaggacaggatt
ctttcagttcgtgaatgtgctcgaactcaaggtttcccagactcttataaattctctgga
caaatgcaccacaagcatcggcaggtcggaaatgctgtccctcctcctttggcatttgca
ctggggagaaaactcaaggaagctgtagaaaggaaacattcaacacagtcggactga
DBGET
integrated database retrieval system
