Vitis riparia (riverbank grape): 117926656
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Entry
117926656 CDS
T07274
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117926656
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
117926656
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
117926656
Prokaryotic type
117926656
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
117926656
NCBI-ProteinID:
XP_034701736
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Position
12:17068227..17073603
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AA seq
354 aa
AA seq
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MQISLPFSTSKVPYLSPLPNPTPQTPLTIPKPHPKSYITAHSSRPKGSGYLSLIGRAIEE
EEEYRKARAEVARNGVDLEGYSIEGISIGGHETCVIIPELKSAFDIGRCPSRAIQQNFLF
ITHAHLDHIGGLPMYVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVA
LDVGETYEMRNNLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKNSGIEI
TDTILSPEVAFTGDTRSDFMLEPRNADALRAKVLITEATFLDNGISIDHAREHGHTHLFE
IIENAEWIRNKAVLLTHFSSRYHIEDIRKAVSKLQSKVSARVVPLMEGFKSMYA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctctctccccttttcaacctccaaagtcccatatctttccccactccccaac
cccactccacagacccctctcaccatcccaaaaccacatcccaaatcctacataacagcc
cattccagtcgcccaaaggggtctgggtatttgtccctaatcggccgagcaattgaagaa
gaagaagagtatagaaaagcgcgggccgaggttgctcgaaatggggttgacttagaaggc
tattcaattgagggcatttccattggcgggcacgagacttgtgtaattattccggaattg
aaatctgcttttgatattgggcggtgtccttcgcgggctattcagcagaactttctattc
attacgcatgctcatcttgatcatattggcgggctaccaatgtatgttgcaactcgtggt
ttgtacaacttaaagcctccaacaatttttgtgcctccttgtattaaagaggatgtggag
aagttatttgacattcatagagcattgagccaggtggaactgaagcttgatttggttgca
ttggatgttggggaaacatatgaaatgcggaataatcttgttgtaaggccgtttaagact
caccatgtcatacccagccagggttatgttatatactcagttagaaaaaagctgaagaag
caatacattcatctcaaaggaaaacagattgagaaattgaagaattctggtattgagatt
acagacactatattgtctccagaggtggccttcacaggggatacaaggtctgattttatg
cttgaaccacggaatgctgatgccttgagggcaaaagttctcataactgaggcaactttc
ctggataatgggatcagcattgatcatgcacgagaacatggtcacactcatttgtttgag
atcatagaaaatgcagagtggattcgaaacaaggctgttctgctaactcatttctcctcc
cgctaccatattgaggacattcgtaaagctgtatcaaagttgcagtccaaggtgtctgcc
agagtggttcctctaatggaaggcttcaaatcaatgtatgcttag
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