Vitis riparia (riverbank grape): 117926758 Help Entry 117926758         CDS       T07274                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism vri  Vitis riparia (riverbank grape) Pathway vri04148   Efferocytosis Brite KEGG Orthology (KO) [BR:vri00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     117926758  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:vri04131]     117926758 Membrane trafficking [BR:vri04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     117926758    Hops complex     117926758 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 VPS18_RING_C Clathrin zf-RING_11 zf-RING_Vps41 zf_RING_Vps8 zf-rbx1 Nup54_57_C zf_RING_Vps8_fungal RPN1_RPN2_N zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 Motif Other DBs NCBI-GeneID:  117926758 NCBI-ProteinID:  XP_034701935 LinkDB All DBs Position 12:15409144..15426867 Genome browser AA seq 986 aa AA seqDB search MDQVRQVFTVDLLERYAAKGRGAITCMAAGNDVIVLGTSKGWIIRHDFGVGDSYDIDLSV GRTGEQSIHRVFVDPGGSHCIATVVGNGGADTYYTHAKWSKPRVLSKLKGLVVNTVAWNR QQITEASTREVILGTDNGQLHEIAVDEKDKREKYMKFLFELAELPEAFMGLQMETASTSN GTRYYVMAVTPTRMYSFTGIGSLDTVFASYLERAVHFMELPGEIPNSELHFFIKQRRAIH FAWLSGAGIYHGGLNFGAQHSSSDGDENFVENKALLNYTKLCEGPEAKPSSLAVSEFHFL VLIGNKVKVLNRISEQIIEELQFDLTSESASRGIIGLCSDASAGLFYAYDQSSIFQVSVN DEGRDMWKVYLDMKEYAAALSNCRDPLQRDQVYLMQAEAAFSTKDFLRAASFFAKINYIL SFEEITLKFISANEQDALRTFLLRKLDNLSKDDKCQITMISTWATELYLDKVNRLLLEDD TASENRNSEYQSIIKEFRAFLSDCKDVLDEATTMRLLESYGRVDELVYFASLKEQYDIVV HHYIQQGEAKKALEVLQKPSVPIDLQYKFAPDLIMLDAYETVESWMATKNLNPRKLIPAM MRYSSEPRAKNETHEVIKYLEFCVHRLLNEDPGVHNLLLCLYAKQEDDSALLRFLQCKFG KGRASGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADK VEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI DDFKEAICSSLEDYNKQIELLKQEMNDATHGADNIRNDISALAQRYALIDRDEECGVCRR KILTVGADFRMTRGYTSVGPMAPFYVFPCGHAFHAQCLITHVTQCTTRAQAELILDLQKQ LTLLDGNTRRESNGGLTEESITSMTPADKIRSQLDDAIAGECPFCGDLMIRDISLPFISP EEAHQDSSWEIKPQSLGNQRSLSLAI NT seq 2961 nt NT seq  +upstreamnt  +downstreamnt atggatcaagtgcggcaggtcttcaccgtcgatctcttggagcggtatgcagccaagggc cgtggagccatcacctgcatggctgctggaaacgacgttatcgtcttgggcaccagcaaa ggctggatcattcgtcatgacttcggcgtcggcgattcctacgatattgatctttctgtg ggtcgaactggggagcaatccatccatagggtttttgttgatcctggtgggagccactgc attgctactgttgttggcaatggaggtgctgatacttattatactcatgcaaagtggagc aaacctcgtgttttaagcaaattgaaaggtcttgtcgtgaacactgttgcttggaataga caacagataacagaagcttctaccagggaggtcattcttggtacggacaatggccaactt catgagattgcagttgatgagaaggacaaaagagagaaatatatgaagtttctttttgaa ttagcagaacttccagaggctttcatgggtttacagatggaaacagctagcacaagcaat ggaacaagatattatgtaatggctgttactcccacccgaatgtattctttcactggaatt ggatcattggatactgtttttgctagttacttggagcgtgctgtacattttatggaactt cctggtgaaataccaaacagcgaactacatttctttatcaagcaaagaagagccatacat tttgcctggctttctggagcaggtatctatcatggtggcctaaattttggagcacagcat agttcatcagatggagatgaaaattttgtggagaacaaggctcttttgaactatacaaaa ctatgtgaaggtcctgaagctaaacccagttctctggcagtatctgaattccattttctg gttctcattgggaacaaagtgaaggttttaaatagaattagcgagcagataatagaggaa cttcaatttgacctaacatcagaatcagcttccaggggtataattggattatgcagtgat gcatctgctgggttgttctatgcatatgatcaaagctccatctttcaggtttcagttaat gatgagggccgagatatgtggaaggtgtacctagacatgaaggagtatgctgcagctcta tcaaattgtcgtgacccacttcagagggatcaagtgtatttaatgcaggctgaagctgct ttctccaccaaggatttccttagagcagcatctttctttgcaaaaattaactatatattg tcatttgaagagatcacgttgaagttcattagtgcaaatgaacaggatgctctaagaact ttcttgttgcggaagcttgataatctttcaaaggatgataaatgccaaataacaatgatt tccacatgggcaactgaattatacttggataaggttaatcggcttctcttggaagatgac actgcttctgagaatcgtaattctgagtaccaatcaattatcaaggaatttcgtgctttt cttagtgactgcaaggatgtgttggatgaggcaactacaatgagactactagaaagttat ggaagggttgatgaattggtatattttgcaagtttgaaagagcagtatgacattgtagtt caccattatattcagcaaggagaagcaaagaaagcattggaagtgcttcaaaaaccttct gttcctatagacctgcagtacaagtttgccccagacctcatcatgcttgatgcatacgaa actgttgagtcatggatggccacaaaaaacctgaacccaaggaaactgattcctgcaatg atgcgctactcaagtgaacctcgtgcaaagaatgaaactcacgaagtcatcaaatatttg gaattttgtgttcatcgtttgcttaatgaggatcctggtgttcacaacttactgctctgt ttgtatgccaagcaggaggatgatagtgcacttctgcgtttcctacaatgcaagtttggc aaaggacgagcaagtggtcctgaattcttctatgatcccaaatatgccttgcgcctttgt ctcaaggaaaagagaatgcgtgcttgtgttcatatatacagcatgatgtctatgcatgaa gaagcagttgctcttgccctgcaggtggacccagagcttgctatggcagaagccgacaag gttgaagacgatgaagacttgaggaagaagctttggcttatggttgccaagcatgtaatt gaacaggaaaagggagctaaaagggaaaacattcggaaggcaatagcatttctgaaggaa actgatggtctcttaaagattgaagatattttaccattttttccggactttgccttgatt gatgatttcaaggaagcaatttgctcttcgttggaggattacaacaagcaaattgaacta ctgaaacaggagatgaatgacgcaacacatggtgctgacaacattagaaatgatatcagt gcacttgctcaaagatatgcccttattgaccgtgatgaggagtgtggggtttgtcgccgc aaaatcttaacagtgggtgcagacttccggatgactaggggttatacatctgtagggcca atggctcctttctatgtctttccatgtggacatgccttccatgcccaatgcctgatcacc catgtgacacagtgcaccacccgagctcaagcagaacttattttggatctgcagaagcaa cttactttactggatggcaacaccaggagggaatcaaatggtggcctaacagaagaatct ataactagcatgacccctgcagataagatccgatcacagttggacgatgccattgctggt gaatgcccattttgcggtgatttgatgatccgtgacatctccttgccgttcatctcccca gaggaagcacatcaggactcttcatgggagataaagccgcaaagccttggaaaccagagg agcctctctttagccatatga

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