KEGG   Vitis riparia (riverbank grape): 117926934
Entry
117926934         CDS       T07274                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117926934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117926934
Enzymes [BR:vri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117926934
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117926934
SSDB
Motif
Pfam: zf-C3HC4 RING_XB3-XBAT31 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-rbx1 Sina_RING
Other DBs
NCBI-GeneID: 117926934
NCBI-ProteinID: XP_034702155
LinkDB
Position
12:complement(18684994..18688742)
AA seq 260 aa
MEQYFQEVMPQNDLNKEDGSSMENWKPVSAADNGSDKNSYGGFDCNICLDFVQDPVVTLC
GHLFCWPCIYKWLYFQSISTENPDQKNPQCPVCKAEVSDTTLIPLYGRGQTTKPSNAKAP
HPDIFIPRRPSGPACGVDAPLTPTTTANPRPSRQLYYRNYRHHSQPYHPHPSSYAESPIL
SPGGMTTTSTYHPIMGMFGEMVYARVFGNSVQNLYTYPNSYHLAGNTNPRMRRHVMQADK
SLSRICFFLFCCILLCLLLF
NT seq 783 nt   +upstreamnt  +downstreamnt
atggagcagtactttcaagaggtcatgccacaaaatgacttaaacaaggaagatgggtct
tctatggagaattggaaacctgtctctgccgcagacaatggatcagataaaaattcctat
ggtggttttgactgcaacatctgcctagactttgttcaggatccggtggtgactctctgt
ggtcatctcttctgctggccctgcatttacaaatggctttatttccagagcatttctact
gaaaatccagaccagaaaaaccctcaatgccccgtatgcaaagctgaagtttcagacacc
accctcatcccactatatggccgaggccaaacaacaaaaccctccaacgccaaggcccca
cacccagacatcttcattccacgaagaccttctggtcccgcttgtggggtcgatgcacct
ctaacacccaccacaacagccaatccacggccttctcggcaactttattatcgcaattat
cggcaccattcacaaccataccatcctcatcctagcagttatgcagagtcaccaatcctt
agccctggtggcatgacaacgaccagcacataccatcccatcatgggaatgtttggagaa
atggtctatgcaagggtgtttgggaactcggttcaaaatttgtacacttacccaaactcg
tatcatcttgctggaaacacaaatccgaggatgagaaggcatgtaatgcaggcggataag
tcgcttagcagaatctgttttttcctattttgctgcatacttttgtgtcttcttttgttc
tga

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