Vitis riparia (riverbank grape): 117927084
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Entry
117927084 CDS
T07274
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04144
Endocytosis
vri04517
IgSF CAM signaling
vri05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117927084
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117927084
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117927084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117927084
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vri04812
]
117927084
Membrane trafficking [BR:
vri04131
]
Others
Actin-binding proteins
Arp2/3 complex
117927084
Cytoskeleton proteins [BR:
vri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117927084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
RMC1_N
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_EML
eIF2A
BNR_3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
117927084
NCBI-ProteinID:
XP_034702379
LinkDB
All DBs
Position
12:21377277..21398994
Genome browser
AA seq
378 aa
AA seq
DB search
MAAISVHQFAKCITCHAWSPDHSMVALCPNSDEVHIYRKSQDKWERVHVLQKHDQIVSGI
DWSARSNRIVTVSHDRNSYVWNQEAAEWVPTLVILRLNRAALCVQWSPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHNSSVTGVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
RDSRTGSSSDAKFGEQIVQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFVSERMVIGVGFDCSPMVFAADGSGIWSFIRFLGERKASSSSARYG
SQFSEAFGKLYGQSKQGVGNDAIEPSRTRGGIHENCINAIAPLTEDGDSKVTRFSTSGLD
GKIVIWDLKNQEDLSVYL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatctctgttcaccagttcgctaagtgcatcacttgccacgcctggagccct
gaccattccatggttgcactttgtccgaatagtgatgaagttcacatctatagaaagtca
caggacaagtgggagagggtacatgttcttcaaaagcatgatcaaattgtttctgggata
gactggagcgcaaggtcaaacagaattgtcactgtatctcatgaccggaattcatatgtt
tggaaccaagaagcagcagaatgggtacctactcttgtcatccttaggctaaaccgtgct
gcactttgtgttcagtggagtccaagagaaaacaagttcgctgttggaagtggggctaag
acagtttgtatatgctattacgagcaagagaataactggtgggtcagtaaacttatcaga
aaaagacataattcttctgtgacgggtgttgcttggcatcctaataacattctccttgca
acaacatcaactgatggaaaatgtcgagtattctctaccttcattaaaggtgttgataca
agggattcaagaacaggctcttcttcagatgcaaaatttggagagcaaattgttcagctt
gatctctcattttcgtgggcatttggtgtgaagtggtctccaagtggcaataccttagct
tatgtaggtcataattctatgatttacttcgttgatgatgttggtccttctcctttagct
caaaatgttgcatttcgcgatttgcctctccgtgatgtcttatttgtttctgagagaatg
gttataggtgtgggatttgactgcagcccaatggtttttgcagcagatggaagtggaata
tggagctttatcagatttcttggtgaaaggaaggcctcatcttcaagtgcaagatatggt
tcacagttttctgaagcatttggaaaattatatggtcaatcaaaacaaggagtgggcaat
gatgcaattgaaccttcgagaacccggggaggcattcatgagaactgcataaatgctatt
gcgccacttacggaggatggggattccaaggtgacgcgcttcagcacttcaggattggac
gggaaaattgttatatgggatttgaagaaccaagaagacctatctgtatatttatag
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