Vitis riparia (riverbank grape): 117927097
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Entry
117927097 CDS
T07274
Name
(RefSeq) protein-tyrosine-phosphatase IBR5
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117927097
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117927097
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117927097
3.1.3.48 protein-tyrosine-phosphatase
117927097
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
117927097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
Init_tRNA_PT
Y_phosphatase
Y_phosphatase2
Y_phosphatase3
PTPlike_phytase
Glyco_hydro_92
Motif
Other DBs
NCBI-GeneID:
117927097
NCBI-ProteinID:
XP_034702395
LinkDB
All DBs
Position
12:17084070..17097819
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AA seq
272 aa
AA seq
DB search
MRKRERENPCGVCGHYHKYEEGEVCGVCGHRIPASSEKTSIQVSAFPSEILPEFLYLGSY
DNASRSELLKTQGISRVLNTVPACQNLYKNSFTYYCLPDDKSLPFDDAIQFLEQCEKDKA
RVLVHCMSGKNRSPAIVIAYLMKCKGWRFAQSYQWVKERRPSVELSQAVHEQLQEYERSI
FGSMESISPTMPIFQPSGAASFTFGFPKANDPLPAPAFNTIGAASIFARPPADVPPHEFK
FGAGQTDKNIVESPFIANPSNPNSSDIPMDSS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagggagagggagaacccgtgcggggtttgtggtcactaccacaaatatgag
gaaggagaggtttgtggtgtttgtggccaccggattccggcatcatcagagaaaacttcg
attcaggtgagcgcttttccgtcagagatcctgccggagtttctgtatttgggcagctac
gataacgcatcgcgctcggagcttctcaagactcagggaatctctcgcgttctcaatacg
gtacctgcttgtcaaaatctctacaaaaattccttcacttattactgcctaccagatgac
aaaagtttaccgtttgatgatgcaattcagtttttagagcaatgtgaaaaggacaaggct
cgtgttcttgtacattgcatgtcgggaaaaaataggtcaccagctattgtaatagcgtac
ttgatgaagtgcaaaggatggaggtttgcacagagctatcagtgggtgaaagagcggaga
ccatctgttgaactatctcaagctgttcacgagcagttgcaggagtatgagcggagtatt
tttgggtcgatggagagcattagccccaccatgccaatcttccaaccttcaggggcagca
tcctttacctttggcttcccaaaggccaatgatccacttcctgctcctgccttcaacacc
attggtgctgcatccatttttgctcgtcctcctgcagacgttcctccacatgagttcaag
ttcggtgctggccagaccgacaagaatatcgtggagagccctttcattgccaacccatca
aatccaaatagcagtgatattcccatggacagctcctga
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