Vitis riparia (riverbank grape): 117927130
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Entry
117927130 CDS
T07274
Name
(RefSeq) CSC1-like protein At3g21620
KO
K21989
calcium permeable stress-gated cation channel
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117927130
Transporters [BR:
vri02000
]
Other transporters
Pores ion channels [TC:
1
]
117927130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
SpoIIE_N
Motif
Other DBs
NCBI-GeneID:
117927130
NCBI-ProteinID:
XP_034702429
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Position
12:17637282..17649130
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AA seq
766 aa
AA seq
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MATLYDIAVAAAINILTAFAFFIAFAILRIQPCNDRVYFPKWYLKGLRNSPLSSGVFVKR
FVNLDFRSYLKFLNWMPAALQMPEPELIDHAGLDSAVYLRIYWTGLKIFVPIALLAFSIM
VPVNWSNGTLEHSGLTYSNIDKLSISNVPTGSPRFWTHLVMAYVFSFWTCYVLKKEYEIV
ATMRLHFLASERRRPDQFTVIVRNVPSDPDESVLELVEHFFLVNHPDHFLGFQAVYDANK
LFKLVDEKKKMHNWLDYYQLKYVRDPSKRPTLKTGYLGLLGNRVDAIDFYTSNIERLAKE
ISVEREVIANDTKYVMPAAFVSFKTRWAAAVCAQTQQTRNPTIWLTEWAPEPRDVYWENL
AIPYVALAVRKLISGVAFFFLTFFFMIPIALVQSLANIEGIEMAVPFLKPLIETHFIKSI
IQGFLPGIALKIFLIFLPSILMLMSKFEGFISRSALERRSAARFYIFQFINVFLGSIITG
TAFQQLNSFIHQSANDIPKIIGTSIPMKATFFITYIMVDGWAGVSGEILRLKPMIIYHLK
NFFTVKTEKDREEAMDPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIIVFFGLAYVV
FRHQIINVYNQEYESAAAFWPDVHMRIIVALVVSQLLLMGLLSTKQAAQSTPLLIALPVL
TIWFHFFCKGRYEPAFVRYPLQEAMMKDTLERVREPNLNLKGYLREAYFHPIFKAGDDES
EMDEASEVEMVQKPELVPTKRHSRRHTPMSSIGSDAPLLNQPAPNL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctctatgatatagcagtagcagcagcaatcaatatcctcactgcatttgct
ttctttatagcatttgccattctaaggattcaaccttgcaatgatcgtgtctattttcca
aaatggtatctgaagggtttaaggaacagcccattaagctcgggtgtatttgtgaagagg
tttgtcaatttggactttagatcgtacctgaagtttctgaactggatgccagctgccttg
caaatgccagaacctgagcttattgaccatgcaggattggattctgctgtttacttgagg
atttactggaccgggcttaaaatttttgttcctattgcattgcttgccttttcaatcatg
gtaccagtgaactggagcaatggcacattagagcattctggtttaacttacagcaatatt
gataagctttctatttcaaatgttccaactggatcacccagattttggactcatttggta
atggcttatgttttttccttctggacgtgttatgtgttgaaaaaggagtatgaaatagtt
gcaacaatgaggttacattttcttgcatcagaacgacgccggccagatcagtttacggtg
attgtgagaaatgtgccatctgaccctgacgaatcagttcttgagcttgtggaacatttt
ttcttggtcaaccatcccgatcactttttgggttttcaggctgtttacgatgcaaacaaa
ctttttaagttagtcgatgagaagaaaaaaatgcataactggcttgattactatcaactc
aaatatgttagagatccctctaaaaggcccacactgaagactggctacctgggcctcttg
ggaaatagggtggatgcaattgatttctatacatctaatattgagagactagcaaaagaa
atatcagtggagagagaggtcattgcaaatgacactaaatatgtcatgcctgcagcattt
gtttcctttaagacacgatgggctgctgctgtttgtgcacaaactcaacaaaccagaaat
ccaactatatggttaactgaatgggctccagaacctcgtgatgtatattgggaaaacttg
gcaattccttatgttgcacttgcagttaggaagctcataagtggtgttgcattcttcttc
cttaccttctttttcatgattcccattgcactggtacagtcccttgcaaacattgaggga
attgagatggcagtaccttttcttaagcctttaattgagacccacttcatcaagtcaatc
atccaaggttttcttcctgggattgctctaaagatctttctcatttttctaccatcaata
ttgatgctaatgtctaaatttgagggatttatcagccggtcagctctagagaggagatct
gcagctagattttatatattccaatttattaatgtttttcttgggagcataatcactgga
actgcatttcaacaattaaatagttttatccaccagtctgcaaatgatatcccaaagatc
atcggaacctcaattccaatgaaggcaactttcttcataacttacataatggttgatgga
tgggctggagtttctggggagattctaagattgaagccaatgataatctaccacttaaag
aatttcttcactgtgaaaactgaaaaagatagggaagaagcgatggatccagggagcctt
agtttcaacacaggcgaaccccaaatacaactctatttcttacttggcctcgtttatgcc
gtggtcacccccattttacttcctttcataatagtattcttcggcttggcatatgttgta
tttcgtcatcagatcataaatgtatacaatcaggagtatgagagtgctgctgcattctgg
cctgatgttcacatgcgcatcatagttgcattagttgtctcacagctgctactaatggga
ttgttaagtacaaaacaagcagctcaatcaactccgctgctcatagcacttccagtcctg
accatatggttccattttttctgcaaagggcgttatgaacctgcttttgttagataccca
ttacaggaagcgatgatgaaagatacgctggaacgagtaagagagccaaacctgaacctg
aaaggctaccttagggaagcctacttccacccaatcttcaaagctggggatgatgaaagt
gagatggatgaagcaagtgaagtggagatggtgcagaagcctgagctagtcccaacaaaa
cgccattcccgaaggcatacaccaatgtctagcataggcagtgatgcgcccctgctgaac
caacctgctccaaacttgtaa
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