Vitis riparia (riverbank grape): 117927197
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Entry
117927197 CDS
T07274
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117927197
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117927197
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117927197
NCBI-ProteinID:
XP_034702527
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Position
12:15354348..15356023
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AA seq
393 aa
AA seq
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MGMKLNTTAIALVLLLASAAQVSEGASIDVTKQGAKADGSDISQALLAAWKEACASPTPS
SVLVPAGTYGLGQISFEGPCKAPINLIVEGTLKAPVDTKNFKADAGWVSFQNIDHFTLSG
KGVFDGQGPAVWGKKCARSSYCGALPINLRFNFLTNSMVRDVTTKDSKQFHVNVLGCKNL
SFYHFTVSAPEESLNTDGIHVGRSSGINITNTNIKTGDDCISIGDGSQQITIDQVTCGPG
HGISVGSLGKYANEAPVVGIKVTGSTLTNTQNGIRVKTWPASPAGIASNMHFEDIIMNNV
GNPILIDQEYCPYNQCKQQVPSRVKISDVTFKNIRGTSTTELAVKLVCSSGVPCQNVQLT
DINLKFNGGAPTSLCKNINPILGGVQQPRSCSA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgaaattgaataccacagcaattgctctggtgctattgttagcatctgctgca
caagtgtctgagggcgcatcgattgatgtgacaaaacaaggtgccaaggctgatgggtcc
gatatcagccaggccttactcgcagcttggaaggaagcatgtgcatcacctactccaagt
tctgttctggttccggcaggaacatatggactaggccaaataagctttgaaggcccctgc
aaggctccaattaatctcattgttgaaggcactttgaaggcccccgtcgataccaaaaat
ttcaaggctgatgctggttgggtttctttccaaaatatcgaccatttcacattgtccggt
aagggagtttttgatggccaaggaccagctgtgtggggcaaaaaatgtgccagatcttcg
tattgcggggcccttcccattaatctgaggttcaacttcctcaccaatagtatggtccgg
gacgtaaccacaaaggacagcaaacagtttcacgtgaacgtactggggtgcaagaattta
agtttctaccatttcaccgtcagtgcaccagaagaaagcctgaacacagatggaatccac
gttggacgttcatcaggaatcaacattactaatacaaacataaaaaccggagacgactgc
atctccatcggtgacggcagccaacaaataaccatcgaccaagtgacctgcggaccgggc
cacggcatcagcgtcggaagtctaggaaagtatgcgaacgaagcaccggttgttggcatt
aaggtaacgggcagcaccctaaccaacactcagaacggcataagagtgaaaacatggcct
gcttccccagccggcattgcctccaatatgcattttgaggacatcatcatgaataatgtc
ggtaatcctatactcatagatcaagagtactgcccatataaccaatgcaaacaacaggta
ccctcacgcgttaagatcagcgatgtcaccttcaaaaatatccgagggacatccacaact
gagcttgctgtcaagctcgtctgtagctcaggagtaccatgccaaaacgtccagcttact
gacattaacttgaaattcaatggaggcgctcccacatccctctgtaagaacatcaatccg
attctagggggcgtgcagcagcccaggagttgctcagcataa
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