Vitis riparia (riverbank grape): 117927203
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Entry
117927203 CDS
T07274
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117927203
04121 Ubiquitin system [BR:
vri04121
]
117927203
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
90S particles
Other 90S particles
117927203
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117927203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_Vps41
VID27
Motif
Other DBs
NCBI-GeneID:
117927203
NCBI-ProteinID:
XP_034702538
LinkDB
All DBs
Position
12:complement(19411056..19423885)
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AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRKQEKAVEYVRALNAAKLDKVFARPFIG
AMDGHIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTD
GRILVSCGTDCTVRLWNVPVATISDSDDSSDNSMKPLAVHVWKNAFWGVDHQWDGNLFAT
AGAQVDIWDHNRSQPVNTFQWGNDSVISVRFNPGEPDLLAASASDRSLILYDLRMSSPAR
KLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYVISGSDDTNLRLWK
AKASEQLGVLLPRERKKHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTMTEA
ERRKEEKRKAHSAPGSISTEPLRKRRIIQEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaagttatatcacgttccacggatgaatttactcgcgaacgaagccaagat
ctccagagggtatttcgaaactttgatccaaacctacgaaagcaagaaaaggcggttgaa
tatgtacgcgctcttaatgcggctaaattggataaggtttttgccaggccgtttattgga
gcaatggatgggcatatagattccatttcttgtatggcaaagaatcccaattacttaaaa
gggatattttctggttcaatggatggagatattcgtctttgggatatagcttccaggcga
acagtttgtcagtttcctggtcatcaaggtgctgtacggggtttgacagcatccacagat
ggacgcattcttgtatcatgtggaactgattgcactgtcaggctatggaatgtacctgtt
gctaccatcagtgactcagatgactcctctgataattctatgaagccactggcggttcac
gtttggaaaaatgcattctggggtgtcgatcatcagtgggatggtaatctttttgccact
gctggtgcccaagtagatatctgggaccacaataggtctcaacctgtcaacacttttcaa
tggggaaatgactctgttatatctgttcgatttaatcctggagaaccagatctcttggca
gcatcagctagtgaccgcagtctaatactatacgatttgcgtatgtcatccccagcaagg
aagcttataatgaggacaaaaactaattctatttcttggaatccaatggaacccatgaac
ttcacagctgctaatgaagattgcaactgctatagctatgatgctagaaaactggatgaa
gccaaatgtgtgcacaaagatcatgtttctgcagtgatggatattgattactcacccact
ggtcgggaatttgtaaccggatcttatgatagaacagtaagaatattccagtacaatggt
gggcatagtcgggaaatctatcatactaagagaatgcaaagggttttctgtgtcaagttc
acctgtgatgcaagttacgtcatctcagggagtgatgacaccaacctacgactttggaaa
gctaaagcatcagaacaattgggagttcttctcccaagggaacggaaaaagcatgaatat
catgaggctgtcaaaaatcggtacaagcacctccccgaggtgaagcgtattgtcaggcac
aggcacttgccaaaaccaatatttaaggctgctgctctcagacgcactatgactgaagcg
gaaaggaggaaagaagagaagaggaaagctcacagtgccccgggaagcatttcaacagag
ccattgcggaaaagaagaattatccaagaagttgagtga
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