Vitis riparia (riverbank grape): 117927272
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Entry
117927272 CDS
T07274
Name
(RefSeq) syntaxin-124-like
KO
K08486
syntaxin 1B/2/3
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117927272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117927272
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117927272
Membrane trafficking [BR:
vri04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117927272
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117927272
Exosomal proteins of other body fluids (saliva and urine)
117927272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Spectrin_SYNE1
STX6_10_61_N
Stonustoxin_helical
GP41
TopoV_HHH
DUF4140
LMBR1
DUF1664
FapA
Motif
Other DBs
NCBI-GeneID:
117927272
NCBI-ProteinID:
XP_034702624
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All DBs
Position
12:16807546..16808951
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AA seq
305 aa
AA seq
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MNDLFSSSFKRFTDLKPQSFDVEAGGDAGRESVNLEKFFEEVENVKDDMRAVENLYKKLQ
DLNEESKTVHNAKTMKDLRARMDTDVVQVLKRVKIIKGKLEALERSNAANRNHPGCGPGS
SADRTRTSVVGGLGKKLKDMMDDFQNLRVRMNAEYKDTIERRYFTITGEKADEETIENLI
SSGESETFLQKAIQDQGRGQIMDTISELQERHGAVKEIEKNLIELHQVFLDMAALVEAQG
QHLNDIESHVAHASSFVRKGTDQLQIARNYQKSGRKWTCIAVGLAICLIIVILFPVLKSL
DVIHL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctcttctcaagttcgttcaaaagatttacagacctcaagccgcagtccttt
gatgttgaggctggtggggatgctggaagagagagtgtcaatctcgaaaaattcttcgaa
gaagtggagaatgtcaaggatgatatgagagctgtggaaaatctctacaagaaactccaa
gatttgaatgaagaaagcaaaacagtccacaatgcgaagaccatgaaagaccttcgggcc
cgaatggatactgatgttgtgcaggtcttgaaacgggttaaaatcatcaaggggaagctg
gaggcccttgaacgctccaacgccgctaaccgcaaccatccaggatgtggccctgggtcc
tccgcagatcgaaccaggacttctgttgttgggggactggggaagaagctcaaggacatg
atggatgattttcagaacttaagggtcaggatgaatgctgaatacaaggacacaatcgag
cgaaggtacttcactataacgggggagaaagcagatgaagagaccatcgagaacttgata
tcgagcggagaaagcgaaaccttccttcagaaggcgattcaagatcagggcagaggccaa
atcatggacaccatttctgaattgcaggagaggcatggggcggtgaaggagatagagaaa
aatctgatagagcttcaccaagtgttcctagacatggccgcactggtagaggcgcagggg
cagcacctgaacgacatcgaaagccatgtagcccatgccagttccttcgtcagaaaaggc
accgatcagctccagattgcgaggaactaccagaagagcggcaggaaatggacctgcatt
gccgttgggctagccatttgtttgatcattgtcatccttttccccgtcttgaagtccctt
gatgtgattcacttgtag
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